Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PTP4A1P7-201ENST00000423476 514 ntBASIC2.65□□□□□ -1.99
HTTP42858 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.65□□□□□ -1.99
HTTP42858 AC108667.1-201ENST00000428618 249 ntBASIC2.65□□□□□ -1.99
HTTP42858 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.65□□□□□ -1.99
HTTP42858 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.65□□□□□ -1.99
HTTP42858 AC011611.5-201ENST00000552477 578 ntBASIC2.65□□□□□ -1.99
HTTP42858 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.65□□□□□ -1.99
HTTP42858 CR589904.2-201ENST00000612533 440 ntBASIC2.65□□□□□ -1.99
HTTP42858 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HTTP42858 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.65□□□□□ -1.99
HTTP42858 AL359715.4-201ENST00000606629 1436 ntBASIC2.65□□□□□ -1.99
HTTP42858 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HTTP42858 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HTTP42858 RNU6-661P-201ENST00000362409 107 ntBASIC2.64□□□□□ -1.99
HTTP42858 SNORA25.9-201ENST00000365087 128 ntBASIC2.64□□□□□ -1.99
HTTP42858 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HTTP42858 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HTTP42858 HSPE1P18-201ENST00000517602 280 ntBASIC2.64□□□□□ -1.99
HTTP42858 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.64□□□□□ -1.99
HTTP42858 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.64□□□□□ -1.99
HTTP42858 Z98742.2-201ENST00000431564 187 ntBASIC2.64□□□□□ -1.99
HTTP42858 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.64□□□□□ -1.99
HTTP42858 GTF2H2B-203ENST00000508065 1432 ntBASIC2.64□□□□□ -1.99
HTTP42858 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HTTP42858 MTND5P29-201ENST00000458676 1807 ntBASIC2.64□□□□□ -1.99
HTTP42858 RPL9P7-201ENST00000330965 580 ntBASIC2.64□□□□□ -1.99
HTTP42858 RPL31P1-201ENST00000398116 372 ntBASIC2.64□□□□□ -1.99
HTTP42858 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.64□□□□□ -1.99
HTTP42858 AL590399.6-201ENST00000446396 307 ntBASIC2.64□□□□□ -1.99
HTTP42858 MRPL50P4-201ENST00000446432 475 ntBASIC2.64□□□□□ -1.99
HTTP42858 RNU6-295P-201ENST00000516901 104 ntBASIC2.64□□□□□ -1.99
HTTP42858 AC020895.1-201ENST00000595362 272 ntBASIC2.64□□□□□ -1.99
HTTP42858 AC011494.1-201ENST00000596454 237 ntBASIC2.64□□□□□ -1.99
HTTP42858 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HTTP42858 OR11H5P-202ENST00000641612 1325 ntBASIC2.63□□□□□ -1.99
HTTP42858 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
HTTP42858 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.63□□□□□ -1.99
HTTP42858 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HTTP42858 RPL21P3-201ENST00000395517 478 ntBASIC2.63□□□□□ -1.99
HTTP42858 TAF9P1-201ENST00000445421 515 ntBASIC2.63□□□□□ -1.99
HTTP42858 TAF9P2-201ENST00000454958 515 ntBASIC2.63□□□□□ -1.99
HTTP42858 AC100870.1-201ENST00000522035 505 ntBASIC2.63□□□□□ -1.99
HTTP42858 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.63□□□□□ -1.99
HTTP42858 AC011460.1-201ENST00000636268 1834 ntBASIC2.63□□□□□ -1.99
HTTP42858 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HTTP42858 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HTTP42858 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
HTTP42858 RNU1-100P-201ENST00000365255 165 ntBASIC2.63□□□□□ -1.99
HTTP42858 AL139156.1-201ENST00000412785 841 ntBASIC2.63□□□□□ -1.99
HTTP42858 RPS26P30-201ENST00000443431 335 ntBASIC2.63□□□□□ -1.99
HTTP42858 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.63□□□□□ -1.99
HTTP42858 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HTTP42858 OR4U1P-201ENST00000554958 912 ntBASIC2.63□□□□□ -1.99
HTTP42858 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.63□□□□□ -1.99
HTTP42858 MIR6779-201ENST00000617283 64 ntBASIC2.63□□□□□ -1.99
HTTP42858 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.63□□□□□ -1.99
HTTP42858 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HTTP42858 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HTTP42858 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.62□□□□□ -1.99
HTTP42858 RPL23AP42-201ENST00000471152 471 ntBASIC2.62□□□□□ -1.99
HTTP42858 AC093278.1-201ENST00000494700 600 ntBASIC2.62□□□□□ -1.99
HTTP42858 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.62□□□□□ -1.99
HTTP42858 AP000857.1-201ENST00000532151 543 ntBASIC2.62□□□□□ -1.99
HTTP42858 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.62□□□□□ -1.99
HTTP42858 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
HTTP42858 AC097714.1-201ENST00000511272 1647 ntBASIC2.62□□□□□ -1.99
HTTP42858 RNU6-14P-201ENST00000384630 106 ntBASIC2.62□□□□□ -1.99
HTTP42858 AC127526.1-201ENST00000417526 366 ntBASIC2.62□□□□□ -1.99
HTTP42858 AL034379.1-201ENST00000423216 253 ntBASIC2.62□□□□□ -1.99
HTTP42858 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.62□□□□□ -1.99
HTTP42858 AL133271.1-201ENST00000538229 291 ntBASIC2.62□□□□□ -1.99
HTTP42858 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.62□□□□□ -1.99
HTTP42858 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.62□□□□□ -1.99
HTTP42858 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HTTP42858 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HTTP42858 AP000893.1-201ENST00000474462 794 ntBASIC2.62□□□□□ -1.99
HTTP42858 DYNLL1P6-201ENST00000503440 264 ntBASIC2.62□□□□□ -1.99
HTTP42858 AP005262.1-201ENST00000582646 997 ntBASIC2.62□□□□□ -1.99
HTTP42858 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
HTTP42858 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC2.61□□□□□ -1.99
HTTP42858 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HTTP42858 MAPK10-373ENST00000641983 6772 ntBASIC2.61□□□□□ -1.99
HTTP42858 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HTTP42858 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HTTP42858 SPA17P1-201ENST00000416656 452 ntBASIC2.61□□□□□ -1.99
HTTP42858 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.61□□□□□ -1.99
HTTP42858 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.61□□□□□ -1.99
HTTP42858 TRBV26-201ENST00000456572 344 ntBASIC2.61□□□□□ -1.99
HTTP42858 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
HTTP42858 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.61□□□□□ -1.99
HTTP42858 SNRPGP18-201ENST00000553000 214 ntBASIC2.61□□□□□ -1.99
HTTP42858 RPL23AP84-201ENST00000571193 464 ntBASIC2.61□□□□□ -1.99
HTTP42858 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC2.61□□□□□ -1.99
HTTP42858 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HTTP42858 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HTTP42858 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HTTP42858 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HTTP42858 Y_RNA.122-201ENST00000363331 96 ntBASIC2.61□□□□□ -1.99
HTTP42858 RNU6-1140P-201ENST00000410517 106 ntBASIC2.61□□□□□ -1.99
HTTP42858 CKS1BP7-201ENST00000522230 235 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms