Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC007389.2-201ENST00000434630 306 ntBASIC3.55□□□□□ -1.84
SOX3P41225 Z74696.2-201ENST00000436514 498 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AL008629.1-201ENST00000438615 184 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX3P41225 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.55□□□□□ -1.84
SOX3P41225 MTCO1P48-201ENST00000448024 1096 ntBASIC3.55□□□□□ -1.84
SOX3P41225 RPS17P13-201ENST00000448974 407 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 SNORA84-201ENST00000459229 133 ntBASIC3.55□□□□□ -1.84
SOX3P41225 MTND1P16-201ENST00000465177 898 ntBASIC3.55□□□□□ -1.84
SOX3P41225 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 AC087385.1-201ENST00000475062 312 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 RPL7P38-201ENST00000488396 739 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.55□□□□□ -1.84
SOX3P41225 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 MTCYBP37-201ENST00000510642 1133 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC021146.1-201ENST00000511202 716 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC010587.2-201ENST00000511727 448 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC016065.2-201ENST00000514530 444 ntBASIC3.55□□□□□ -1.84
SOX3P41225 SCARNA14-201ENST00000516903 136 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 AP003461.1-201ENST00000528866 78 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.55□□□□□ -1.84
SOX3P41225 AC145350.1-201ENST00000567426 208 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX3P41225 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX3P41225 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
SOX3P41225 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 VN1R82P-201ENST00000601481 356 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 AC068313.1-201ENST00000604028 1008 ntBASIC3.55□□□□□ -1.84
SOX3P41225 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 AL592221.1-201ENST00000605266 382 ntBASIC3.55□□□□□ -1.84
SOX3P41225 AL158042.1-201ENST00000605338 460 ntBASIC3.55□□□□□ -1.84
SOX3P41225 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.55□□□□□ -1.84
SOX3P41225 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.55□□□□□ -1.84
SOX3P41225 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SOX3P41225 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX3P41225 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 RPS4XP5-202ENST00000449995 1334 ntBASIC3.54□□□□□ -1.84
SOX3P41225 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SOX3P41225 RN7SKP44-201ENST00000363602 316 ntBASIC3.54□□□□□ -1.84
SOX3P41225 RNU6-1226P-201ENST00000384317 107 ntBASIC3.54□□□□□ -1.84
SOX3P41225 MIR199A2-201ENST00000385289 110 ntBASIC3.54□□□□□ -1.84
SOX3P41225 HSPE1P8-201ENST00000406997 288 ntBASIC3.54□□□□□ -1.84
SOX3P41225 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 RNU2-28P-201ENST00000410457 189 ntBASIC3.54□□□□□ -1.84
SOX3P41225 SNORA57.3-201ENST00000411095 141 ntBASIC3.54□□□□□ -1.84
SOX3P41225 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 AC004987.3-201ENST00000413879 771 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX3P41225 CYP4F29P-201ENST00000420685 446 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC093698.1-201ENST00000423843 571 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX3P41225 MTND2P20-201ENST00000440805 661 ntBASIC3.54□□□□□ -1.84
SOX3P41225 RPL23AP16-201ENST00000441715 421 ntBASIC3.54□□□□□ -1.84
SOX3P41225 Z95327.1-201ENST00000446082 482 ntBASIC3.54□□□□□ -1.84
SOX3P41225 SLC31A1P1-201ENST00000451221 567 ntBASIC3.54□□□□□ -1.84
SOX3P41225 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX3P41225 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX3P41225 AC021146.8-201ENST00000507455 733 ntBASIC3.54□□□□□ -1.84
SOX3P41225 HMGB1P28-201ENST00000507778 552 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX3P41225 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX3P41225 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX3P41225 AC105185.1-201ENST00000518705 535 ntBASIC3.54□□□□□ -1.84
SOX3P41225 IGHV3-32-201ENST00000519182 355 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX3P41225 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX3P41225 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX3P41225 AC125611.1-201ENST00000549563 229 ntBASIC3.54□□□□□ -1.84
SOX3P41225 LSM6P2-201ENST00000552208 177 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC009712.1-201ENST00000564938 316 ntBASIC3.54□□□□□ -1.84
SOX3P41225 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX3P41225 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX3P41225 AC025811.1-201ENST00000604312 472 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC091304.6-201ENST00000619761 202 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC007490.1-201ENST00000624321 703 ntBASIC3.54□□□□□ -1.84
SOX3P41225 AC091905.1-201ENST00000624400 311 ntBASIC3.54□□□□□ -1.84
SOX3P41225 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX3P41225 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms