Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 RPL29P29-201ENST00000448725 423 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.41□□□□□ -1.86
BRCA1P38398 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 RNU6-1308P-201ENST00000516817 103 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 ATP5F1P5-201ENST00000526403 760 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCA1P38398 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.41□□□□□ -1.86
BRCA1P38398 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 MTND5P24-201ENST00000438892 1767 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 RPL7P10-201ENST00000417407 739 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 UBE2V1P5-201ENST00000440070 405 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC011037.1-201ENST00000483964 558 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC012170.1-201ENST00000495139 359 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC091917.2-201ENST00000505002 744 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.41□□□□□ -1.86
BRCA1P38398 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 AC243972.3-201ENST00000539655 198 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.41□□□□□ -1.86
BRCA1P38398 AP001542.1-201ENST00000591314 200 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 PCNAP1-202ENST00000595299 752 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC090525.3-201ENST00000605601 189 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 LINC00216-201ENST00000623548 1126 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 AC116563.2-201ENST00000624751 535 ntBASIC3.41□□□□□ -1.86
BRCA1P38398 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
BRCA1P38398 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRCA1P38398 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.86
BRCA1P38398 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
BRCA1P38398 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
BRCA1P38398 MIR124-3-201ENST00000384866 87 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 RPL31P52-201ENST00000407532 367 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 SNORA3.2-201ENST00000408221 125 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 AL512504.1-201ENST00000415494 778 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 RPS12P23-201ENST00000419579 400 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.4□□□□□ -1.87
BRCA1P38398 RPL7P12-201ENST00000446719 750 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCA1P38398 AC090819.1-201ENST00000523800 1111 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 AP001636.2-201ENST00000525517 696 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.4□□□□□ -1.87
BRCA1P38398 POLR2KP1-201ENST00000553226 168 ntBASIC3.4□□□□□ -1.87
BRCA1P38398 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCA1P38398 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.4□□□□□ -1.87
BRCA1P38398 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRCA1P38398 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BRCA1P38398 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
BRCA1P38398 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA1P38398 MTCO1P52-201ENST00000433928 531 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 AC126121.1-201ENST00000482313 553 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.39□□□□□ -1.87
BRCA1P38398 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.39□□□□□ -1.87
BRCA1P38398 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.39□□□□□ -1.87
BRCA1P38398 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA1P38398 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA1P38398 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA1P38398 AP001646.1-201ENST00000527936 915 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 AL161713.1-201ENST00000555538 145 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
BRCA1P38398 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA1P38398 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
BRCA1P38398 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA1P38398 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA1P38398 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
BRCA1P38398 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA1P38398 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRCA1P38398 UBE2D3P1-201ENST00000436669 444 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 SNRPGP5-201ENST00000456003 220 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA1P38398 RPL7P20-201ENST00000520308 745 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.39□□□□□ -1.87
BRCA1P38398 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.39□□□□□ -1.87
BRCA1P38398 AC007424.1-203ENST00000554613 687 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 MIR4648-201ENST00000580107 72 ntBASIC3.39□□□□□ -1.87
BRCA1P38398 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA1P38398 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA1P38398 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA1P38398 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA1P38398 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA1P38398 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
BRCA1P38398 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.38□□□□□ -1.87
BRCA1P38398 MIR1289-2-201ENST00000408360 111 ntBASIC3.38□□□□□ -1.87
BRCA1P38398 FAR1P1-201ENST00000427163 934 ntBASIC3.38□□□□□ -1.87
BRCA1P38398 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.38□□□□□ -1.87
BRCA1P38398 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA1P38398 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms