Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SNORD116-6-201ENST00000384711 96 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 MIR7-3-201ENST00000384898 110 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 MIR122-201ENST00000385044 85 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AL583834.1-201ENST00000406943 343 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AL023807.1-201ENST00000407932 359 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC13P31276 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HOXC13P31276 MTND4P3-201ENST00000417829 541 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 TCEA1P2-201ENST00000420496 906 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC13P31276 HIGD1AP4-201ENST00000430194 280 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC13P31276 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC13P31276 AL353748.1-201ENST00000440753 474 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC13P31276 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC13P31276 RPL6P9-201ENST00000466502 859 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC010285.1-201ENST00000470580 392 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC010301.1-201ENST00000473936 355 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 RPL7P24-201ENST00000493052 752 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AL139099.1-201ENST00000497398 403 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 OR5H5P-201ENST00000503164 928 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXC13P31276 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC13P31276 AC117522.2-201ENST00000510049 657 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC13P31276 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 RN7SKP289-201ENST00000517244 295 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC026403.1-201ENST00000518938 295 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXC13P31276 DUXAP5-201ENST00000529668 529 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC118942.1-201ENST00000529674 1035 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC023538.1-201ENST00000534576 736 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC13P31276 AC106754.1-201ENST00000562632 1513 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC13P31276 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC13P31276 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXC13P31276 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXC13P31276 SNORD39.3-201ENST00000584451 71 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC025588.3-201ENST00000604182 274 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC122108.2-201ENST00000611946 526 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AL592148.2-201ENST00000612210 372 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC13P31276 PRO1804-201ENST00000623780 2050 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 AC073530.2-201ENST00000623987 261 ntBASIC4.08□□□□□ -1.76
HOXC13P31276 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXC13P31276 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXC13P31276 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXC13P31276 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
HOXC13P31276 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXC13P31276 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXC13P31276 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC13P31276 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC13P31276 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC13P31276 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC13P31276 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC13P31276 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC13P31276 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC13P31276 Y_RNA.578-201ENST00000390903 88 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 RNU4-78P-201ENST00000410940 126 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC13P31276 AL133384.1-201ENST00000412744 351 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 USP9YP14-201ENST00000430663 563 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 HMGN2P31-201ENST00000432430 273 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 MTCO2P20-201ENST00000437339 673 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AC241584.1-201ENST00000438469 1241 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 HMGB1P37-201ENST00000439613 609 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 VN1R25P-201ENST00000443385 738 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 SLC31A1P1-201ENST00000451221 567 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 VN1R40P-201ENST00000455196 941 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 HMGB1P22-201ENST00000505315 124 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 SNORA74D-201ENST00000516404 141 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 SNORA31.20-201ENST00000517111 133 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 MTND2P32-201ENST00000521584 1038 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC13P31276 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC087499.8-201ENST00000578406 226 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC008638.3-201ENST00000603341 463 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC091167.4-201ENST00000605079 184 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AC128687.1-201ENST00000605304 619 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC026585.1-201ENST00000619582 524 ntBASIC4.07□□□□□ -1.76
HOXC13P31276 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC13P31276 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HOXC13P31276 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC13P31276 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms