Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CDR1-202ENST00000625883 1485 ntBASIC6.15□□□□□ -1.42
RXRBP28702 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RXRBP28702 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RXRBP28702 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
RXRBP28702 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RXRBP28702 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 Y_RNA.67-201ENST00000362870 100 ntBASIC6.15□□□□□ -1.42
RXRBP28702 Y_RNA.144-201ENST00000363521 113 ntBASIC6.15□□□□□ -1.42
RXRBP28702 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RXRBP28702 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 Z92545.1-201ENST00000411782 234 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 AL953862.1-201ENST00000423016 168 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 HMGB3P10-201ENST00000434734 572 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 AL500522.2-201ENST00000448562 343 ntBASIC6.15□□□□□ -1.42
RXRBP28702 NPM1P39-201ENST00000449818 867 ntBASIC6.15□□□□□ -1.42
RXRBP28702 C1DP4-201ENST00000455429 424 ntBASIC6.15□□□□□ -1.42
RXRBP28702 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 AC021660.1-201ENST00000465006 554 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC093278.1-201ENST00000494700 600 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.15□□□□□ -1.42
RXRBP28702 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.15□□□□□ -1.42
RXRBP28702 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.15□□□□□ -1.42
RXRBP28702 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.15□□□□□ -1.42
RXRBP28702 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.15□□□□□ -1.42
RXRBP28702 AP003034.1-201ENST00000534621 422 ntBASIC6.15□□□□□ -1.42
RXRBP28702 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.15□□□□□ -1.42
RXRBP28702 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.15□□□□□ -1.42
RXRBP28702 RPL21P5-201ENST00000554662 472 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC040958.1-201ENST00000561102 201 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.15□□□□□ -1.42
RXRBP28702 AC037471.2-201ENST00000564941 598 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.15□□□□□ -1.42
RXRBP28702 AC019176.2-201ENST00000611579 315 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AL713922.2-201ENST00000619384 716 ntBASIC6.15□□□□□ -1.42
RXRBP28702 PISRT1-201ENST00000626175 531 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC110994.2-201ENST00000635481 492 ntBASIC6.15□□□□□ -1.42
RXRBP28702 AC027228.2-201ENST00000567141 2154 ntBASIC6.15□□□□□ -1.43
RXRBP28702 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.15□□□□□ -1.43
RXRBP28702 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
RXRBP28702 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RXRBP28702 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.15□□□□□ -1.43
RXRBP28702 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RXRBP28702 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
RXRBP28702 AC021242.1-201ENST00000507315 2035 ntBASIC6.15□□□□□ -1.43
RXRBP28702 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RXRBP28702 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RXRBP28702 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RXRBP28702 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RXRBP28702 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RXRBP28702 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 AL161912.2-201ENST00000565707 3007 ntBASIC6.14□□□□□ -1.43
RXRBP28702 MTND5P3-201ENST00000438536 1800 ntBASIC6.14□□□□□ -1.43
RXRBP28702 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 Y_RNA.216-201ENST00000364205 93 ntBASIC6.14□□□□□ -1.43
RXRBP28702 SNORA51.12-201ENST00000384448 134 ntBASIC6.14□□□□□ -1.43
RXRBP28702 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RXRBP28702 Y_RNA.608-201ENST00000410647 95 ntBASIC6.14□□□□□ -1.43
RXRBP28702 MTND3P17-201ENST00000416968 344 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AL161631.1-201ENST00000417933 486 ntBASIC6.14□□□□□ -1.43
RXRBP28702 PIGFP2-201ENST00000421400 651 ntBASIC6.14□□□□□ -1.43
RXRBP28702 DYNLL1P7-201ENST00000429273 258 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AL513175.1-201ENST00000431492 780 ntBASIC6.14□□□□□ -1.43
RXRBP28702 GTF2IP20-201ENST00000431663 360 ntBASIC6.14□□□□□ -1.43
RXRBP28702 FCF1P1-201ENST00000432690 571 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 MTND3P2-201ENST00000438452 342 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 AC098583.1-201ENST00000480875 255 ntBASIC6.14□□□□□ -1.43
RXRBP28702 RN7SL558P-201ENST00000497468 299 ntBASIC6.14□□□□□ -1.43
RXRBP28702 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.14□□□□□ -1.43
RXRBP28702 RN7SKP13-201ENST00000515933 244 ntBASIC6.14□□□□□ -1.43
RXRBP28702 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.14□□□□□ -1.43
RXRBP28702 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 DEFB131D-201ENST00000526803 184 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 SLC2A13P1-201ENST00000531560 322 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.14□□□□□ -1.43
RXRBP28702 CYCSP2-201ENST00000558168 301 ntBASIC6.14□□□□□ -1.43
RXRBP28702 SNORA74C-1-201ENST00000580726 201 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.14□□□□□ -1.43
RXRBP28702 AL162413.1-201ENST00000603198 110 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AC112187.2-201ENST00000604345 283 ntBASIC6.14□□□□□ -1.43
RXRBP28702 AL158196.1-201ENST00000616786 434 ntBASIC6.14□□□□□ -1.43
RXRBP28702 MIR6839-201ENST00000620425 113 ntBASIC6.14□□□□□ -1.43
RXRBP28702 C2orf27A-204ENST00000623058 969 ntBASIC6.14□□□□□ -1.43
RXRBP28702 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RXRBP28702 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.14□□□□□ -1.43
RXRBP28702 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms