Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CD40P25942 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CD40P25942 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CD40P25942 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 MTND4P29-201ENST00000503122 1372 ntBASIC4.56□□□□□ -1.68
CD40P25942 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CD40P25942 AC140134.1-201ENST00000511830 3544 ntBASIC4.56□□□□□ -1.68
CD40P25942 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 NACAP2-201ENST00000318548 624 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNA5SP305-201ENST00000362665 119 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNU6-996P-201ENST00000365438 107 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNU4-48P-201ENST00000365559 182 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNU1-106P-201ENST00000384382 164 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNU6-606P-201ENST00000384721 111 ntBASIC4.56□□□□□ -1.68
CD40P25942 CYB5AP4-201ENST00000396692 399 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC013442.1-201ENST00000397347 228 ntBASIC4.56□□□□□ -1.68
CD40P25942 RPL21P67-201ENST00000402896 478 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNU2-36P-201ENST00000410361 191 ntBASIC4.56□□□□□ -1.68
CD40P25942 RNA5SP118-201ENST00000410385 109 ntBASIC4.56□□□□□ -1.68
CD40P25942 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 SNRPFP1-201ENST00000414761 252 ntBASIC4.56□□□□□ -1.68
CD40P25942 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.56□□□□□ -1.68
CD40P25942 OR51A5P-201ENST00000415429 942 ntBASIC4.56□□□□□ -1.68
CD40P25942 AL137014.1-201ENST00000420490 1226 ntBASIC4.56□□□□□ -1.68
CD40P25942 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.56□□□□□ -1.68
CD40P25942 RPL23AP38-201ENST00000423801 469 ntBASIC4.56□□□□□ -1.68
CD40P25942 EIF1P3-201ENST00000423841 334 ntBASIC4.56□□□□□ -1.68
CD40P25942 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 MED13P1-201ENST00000428342 171 ntBASIC4.56□□□□□ -1.68
CD40P25942 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.56□□□□□ -1.68
CD40P25942 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.56□□□□□ -1.68
CD40P25942 DDX3P2-201ENST00000446138 111 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 AC016696.1-201ENST00000446949 318 ntBASIC4.56□□□□□ -1.68
CD40P25942 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 AC009963.2-201ENST00000453431 138 ntBASIC4.56□□□□□ -1.68
CD40P25942 CBX1P2-201ENST00000453841 458 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 RPL36AP13-201ENST00000457490 317 ntBASIC4.56□□□□□ -1.68
CD40P25942 RPS27AP17-201ENST00000463344 455 ntBASIC4.56□□□□□ -1.68
CD40P25942 RN7SL808P-201ENST00000496066 299 ntBASIC4.56□□□□□ -1.68
CD40P25942 RN7SL591P-201ENST00000496150 292 ntBASIC4.56□□□□□ -1.68
CD40P25942 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 GAPDHP56-201ENST00000506031 988 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC026427.2-201ENST00000506228 536 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 MTCO1P35-201ENST00000515270 228 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC097486.1-201ENST00000515331 210 ntBASIC4.56□□□□□ -1.68
CD40P25942 SNORD27.1-201ENST00000516319 72 ntBASIC4.56□□□□□ -1.68
CD40P25942 RN7SKP66-201ENST00000516681 231 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC103783.1-201ENST00000520506 373 ntBASIC4.56□□□□□ -1.68
CD40P25942 HMGN1P28-201ENST00000521340 364 ntBASIC4.56□□□□□ -1.68
CD40P25942 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.56□□□□□ -1.68
CD40P25942 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.56□□□□□ -1.68
CD40P25942 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.56□□□□□ -1.68
CD40P25942 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.56□□□□□ -1.68
CD40P25942 AC093838.1-201ENST00000613014 469 ntBASIC4.56□□□□□ -1.68
CD40P25942 AC068870.2-201ENST00000620635 389 ntBASIC4.56□□□□□ -1.68
CD40P25942 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
CD40P25942 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD40P25942 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD40P25942 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.56□□□□□ -1.68
CD40P25942 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD40P25942 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.55□□□□□ -1.68
CD40P25942 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.55□□□□□ -1.68
CD40P25942 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
CD40P25942 Y_RNA.255-201ENST00000364581 97 ntBASIC4.55□□□□□ -1.68
CD40P25942 Y_RNA.279-201ENST00000364763 95 ntBASIC4.55□□□□□ -1.68
CD40P25942 AL136372.1-201ENST00000403060 228 ntBASIC4.55□□□□□ -1.68
CD40P25942 RNU6-712P-201ENST00000410558 100 ntBASIC4.55□□□□□ -1.68
CD40P25942 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.55□□□□□ -1.68
CD40P25942 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms