Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.42□□□□□ -2.02
FREM3P0C091 AC067852.4-201ENST00000590314 478 ntBASIC2.42□□□□□ -2.02
FREM3P0C091 AC107871.2-201ENST00000612894 502 ntBASIC2.42□□□□□ -2.02
FREM3P0C091 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.42□□□□□ -2.02
FREM3P0C091 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
FREM3P0C091 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
FREM3P0C091 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FREM3P0C091 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FREM3P0C091 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.41□□□□□ -2.02
FREM3P0C091 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
FREM3P0C091 AC104446.1-201ENST00000613728 1321 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 PRELID3BP11-201ENST00000414230 479 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 RPL31P45-201ENST00000419532 356 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AL645937.1-202ENST00000421799 937 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AL513043.1-201ENST00000439124 535 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 RPL23AP62-201ENST00000463396 453 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.41□□□□□ -2.02
FREM3P0C091 KC877982.1-201ENST00000602313 470 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 AL355816.1-201ENST00000607951 118 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AL590808.1-201ENST00000618696 141 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AC010149.2-201ENST00000637608 315 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
FREM3P0C091 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.41□□□□□ -2.02
FREM3P0C091 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.41□□□□□ -2.02
FREM3P0C091 CALM1P2-201ENST00000452941 448 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.41□□□□□ -2.02
FREM3P0C091 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.41□□□□□ -2.02
FREM3P0C091 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.41□□□□□ -2.02
FREM3P0C091 AC022884.3-201ENST00000579571 248 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.41□□□□□ -2.02
FREM3P0C091 AL359535.1-201ENST00000612100 1087 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 ZNF90P1-201ENST00000480493 1951 ntBASIC2.41□□□□□ -2.02
FREM3P0C091 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.4□□□□□ -2.02
FREM3P0C091 DCAF13P3-201ENST00000561147 1334 ntBASIC2.4□□□□□ -2.02
FREM3P0C091 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
FREM3P0C091 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
FREM3P0C091 RPL9P7-201ENST00000330965 580 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
FREM3P0C091 RNU4-82P-201ENST00000362443 140 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 RPL31P50-201ENST00000471002 296 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 RPL23AP11-201ENST00000475260 469 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 RNA5SP356-201ENST00000515972 94 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 RPL12P22-201ENST00000519073 490 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.4□□□□□ -2.03
FREM3P0C091 AC096947.1-201ENST00000603233 470 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 XPOTP1-201ENST00000443317 2398 ntBASIC2.4□□□□□ -2.03
FREM3P0C091 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.4□□□□□ -2.03
FREM3P0C091 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
FREM3P0C091 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
FREM3P0C091 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.4□□□□□ -2.03
FREM3P0C091 AL512633.1-201ENST00000399931 655 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AC073069.1-201ENST00000428657 441 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AL049830.2-201ENST00000480072 201 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AP001086.1-201ENST00000494882 321 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AL035404.1-201ENST00000497982 568 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AC010486.1-201ENST00000511793 424 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 RNU4-29P-201ENST00000515943 174 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 RNA5SP309-201ENST00000516670 106 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.39□□□□□ -2.03
FREM3P0C091 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FREM3P0C091 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
FREM3P0C091 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.39□□□□□ -2.03
FREM3P0C091 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
FREM3P0C091 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.39□□□□□ -2.03
FREM3P0C091 RNU6-673P-201ENST00000365084 104 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
FREM3P0C091 RNA5SP80-201ENST00000410475 111 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.39□□□□□ -2.03
FREM3P0C091 RPL7P59-201ENST00000447700 943 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.39□□□□□ -2.03
FREM3P0C091 HMGB3P30-201ENST00000457863 606 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AC004924.1-201ENST00000480160 781 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.39□□□□□ -2.03
FREM3P0C091 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.39□□□□□ -2.03
FREM3P0C091 AC022790.1-201ENST00000522872 204 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AP003122.3-201ENST00000526316 255 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 HIGD1AP10-201ENST00000527837 282 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 HPRT1P3-201ENST00000539521 576 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 OR4H12P-201ENST00000556269 907 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.39□□□□□ -2.03
FREM3P0C091 NF1P5-201ENST00000588287 448 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.39□□□□□ -2.03
FREM3P0C091 AL035413.2-201ENST00000604801 525 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 AC103710.3-201ENST00000608157 948 ntBASIC2.39□□□□□ -2.03
FREM3P0C091 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
FREM3P0C091 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
FREM3P0C091 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
FREM3P0C091 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FREM3P0C091 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FREM3P0C091 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FREM3P0C091 RNU6-532P-201ENST00000384318 107 ntBASIC2.38□□□□□ -2.03
FREM3P0C091 MT-TP-201ENST00000387461 68 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms