Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD4P09016 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD4P09016 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD4P09016 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD4P09016 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD4P09016 MIR5187-201ENST00000583479 76 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD4P09016 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXD4P09016 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD4P09016 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD4P09016 RMST_8.1-201ENST00000610287 165 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 TUSC7.1-201ENST00000610969 165 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 AL450489.1-201ENST00000612071 468 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 AC107075.1-201ENST00000613695 314 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXD4P09016 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD4P09016 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD4P09016 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD4P09016 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXD4P09016 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD4P09016 CR381670.1-201ENST00000624291 1693 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD4P09016 AC025263.3-201ENST00000622965 1396 ntBASIC3.48□□□□□ -1.85
HOXD4P09016 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
HOXD4P09016 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HOXD4P09016 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HOXD4P09016 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HOXD4P09016 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HOXD4P09016 U8.11-201ENST00000384699 133 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 U8.12-201ENST00000384701 133 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 MIR184-201ENST00000384962 84 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 MIR199A2-201ENST00000385289 110 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 RPL21P17-201ENST00000397467 475 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 RN7SKP285-201ENST00000410137 318 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD4P09016 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HOXD4P09016 RPS12P23-201ENST00000419579 400 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD4P09016 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD4P09016 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXD4P09016 GTF2IP7-202ENST00000436677 309 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 COX7BP2-201ENST00000437976 242 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 TXNP1-201ENST00000441872 371 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HOXD4P09016 AC079776.3-201ENST00000450665 370 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 U8.18-201ENST00000459285 133 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 RPL23AP62-201ENST00000463396 453 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXD4P09016 AC011979.1-201ENST00000472300 483 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 RPL21P103-201ENST00000479921 488 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXD4P09016 RN7SKP96-201ENST00000516948 297 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD4P09016 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD4P09016 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD4P09016 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
HOXD4P09016 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD4P09016 AL389895.1-201ENST00000554127 252 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD4P09016 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXD4P09016 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD4P09016 MIR3912-201ENST00000577566 105 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 AC022662.1-201ENST00000580252 331 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 AC005412.1-201ENST00000580812 1049 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
HOXD4P09016 BNIP3P24-201ENST00000593398 557 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD4P09016 AL049634.3-201ENST00000604968 457 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 AC105227.2-201ENST00000615075 605 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HOXD4P09016 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD4P09016 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 AC011978.2-201ENST00000569835 2054 ntBASIC3.47□□□□□ -1.85
HOXD4P09016 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD4P09016 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXD4P09016 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXD4P09016 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXD4P09016 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HOXD4P09016 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD4P09016 RNU6-619P-201ENST00000365146 108 ntBASIC3.46□□□□□ -1.86
HOXD4P09016 U3.15-201ENST00000365398 212 ntBASIC3.46□□□□□ -1.86
HOXD4P09016 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD4P09016 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXD4P09016 ATP5F1P4-201ENST00000397288 746 ntBASIC3.46□□□□□ -1.86
HOXD4P09016 AL049545.1-201ENST00000401856 572 ntBASIC3.46□□□□□ -1.86
HOXD4P09016 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD4P09016 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD4P09016 OR51A3P-201ENST00000413596 924 ntBASIC3.46□□□□□ -1.86
HOXD4P09016 PRELID3BP11-201ENST00000414230 479 ntBASIC3.46□□□□□ -1.86
HOXD4P09016 NUP35P2-201ENST00000416748 943 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms