Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MTCO3P42-201ENST00000509488 518 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 TMEM248P1-201ENST00000510579 951 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 MTCO3P39-201ENST00000514812 518 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 RNU6-491P-201ENST00000516099 110 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 OR4V1P-201ENST00000525394 1140 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AC079600.2-201ENST00000550076 130 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AL513477.2-201ENST00000607858 568 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AC022079.2-201ENST00000619739 566 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AL137790.1-201ENST00000634283 177 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 ASNSP3-201ENST00000451989 1306 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AL049737.1-201ENST00000413920 1403 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC093908.1-201ENST00000623125 8092 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 MIR26A1-201ENST00000362205 77 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 RNU6-564P-201ENST00000410983 104 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 NPM1P49-201ENST00000448027 714 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 PTGES3P5-201ENST00000455109 434 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AP001207.1-201ENST00000524051 481 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AP000857.1-201ENST00000532151 543 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC084033.1-201ENST00000550830 633 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 OR4T1P-201ENST00000554933 911 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 MIR4506-201ENST00000584693 77 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC010928.3-201ENST00000587712 541 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 MIR6864-201ENST00000617935 70 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AL391597.1-201ENST00000618707 694 ntBASIC2.81□□□□□ -1.96
HLA-DQB2P05538 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HLA-DQB2P05538 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL157700.1-201ENST00000561973 1432 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 RNA5SP189-201ENST00000364920 115 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 MIR421-201ENST00000365696 85 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 MIR483-201ENST00000385070 76 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL590290.1-201ENST00000405336 380 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL355379.1-201ENST00000405542 640 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 RPL34P26-201ENST00000445636 354 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL136126.1-201ENST00000473603 402 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC107398.1-201ENST00000486904 505 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC117522.3-201ENST00000507974 584 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL133271.1-201ENST00000538229 291 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 OR4H12P-201ENST00000556269 907 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AC005156.1-201ENST00000613371 573 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AP004607.9-201ENST00000618202 316 ntBASIC2.8□□□□□ -1.96
HLA-DQB2P05538 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HLA-DQB2P05538 AL079305.1-201ENST00000623159 3008 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 MTND4P31-201ENST00000425607 1343 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 DYNLT3P1-201ENST00000378574 347 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AL138827.1-201ENST00000402666 306 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 RNU2-6P-201ENST00000411404 190 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC096664.2-201ENST00000411843 406 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC234782.4-201ENST00000417646 1048 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC241520.1-201ENST00000422654 1099 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC087499.2-201ENST00000432861 149 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AC107083.1-201ENST00000439643 279 ntBASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DQB2P05538 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms