Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
COL2A1P02458 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.82□□□□□ -1.8
COL2A1P02458 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL2A1P02458 SAGE4P-201ENST00000442271 3381 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC021755.1-201ENST00000559747 1447 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC099786.3-201ENST00000565735 1410 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL2A1P02458 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL2A1P02458 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.81□□□□□ -1.8
COL2A1P02458 Y_RNA.62-201ENST00000362840 99 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 RNU6-1214P-201ENST00000363650 109 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC104297.1-201ENST00000393779 870 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 HMGB1P13-201ENST00000406019 642 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 RPL5P18-201ENST00000406671 891 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.81□□□□□ -1.8
COL2A1P02458 AL513174.1-201ENST00000423182 629 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC093698.1-201ENST00000423843 571 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 BX890604.2-201ENST00000427883 474 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AL365396.1-201ENST00000430854 671 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AL121890.1-201ENST00000435457 205 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 FABP5P3-201ENST00000437960 408 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC005002.1-201ENST00000447458 540 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 TRBV8-1-201ENST00000481590 279 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 RNU6-237P-201ENST00000515985 71 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 RN7SKP116-201ENST00000516902 319 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 HMGB1P46-201ENST00000520062 610 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL2A1P02458 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC004923.2-201ENST00000529649 369 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 NOP56P3-201ENST00000549457 385 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.81□□□□□ -1.8
COL2A1P02458 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.81□□□□□ -1.8
COL2A1P02458 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.81□□□□□ -1.8
COL2A1P02458 AL162713.1-201ENST00000604480 262 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 Z82195.1-201ENST00000604558 398 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC073387.2-201ENST00000604797 784 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC135507.1-201ENST00000607214 561 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC103591.3-201ENST00000608684 209 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 VN1R9P-201ENST00000614184 867 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AL158196.1-201ENST00000616786 434 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC018692.3-201ENST00000623929 123 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC084035.1-201ENST00000634543 607 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL2A1P02458 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL2A1P02458 AC006504.1-201ENST00000562493 3666 ntBASIC3.81□□□□□ -1.8
COL2A1P02458 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL2A1P02458 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL2A1P02458 RAD1P1-201ENST00000231383 813 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 RNU5B-4P-201ENST00000363508 111 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL2A1P02458 SNORD116-9-201ENST00000384000 95 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 SNORD116-3-201ENST00000384287 95 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 SNORD116-7-201ENST00000384404 95 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 SNORD116-5-201ENST00000384462 95 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AL158050.1-201ENST00000416077 457 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 USP9YP11-201ENST00000427537 717 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.8□□□□□ -1.8
COL2A1P02458 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.8□□□□□ -1.8
COL2A1P02458 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 AC118469.1-201ENST00000442943 488 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL2A1P02458 PTGES3P5-201ENST00000455109 434 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 GOLGA5P1-201ENST00000507317 980 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL2A1P02458 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.8□□□□□ -1.8
COL2A1P02458 snoU109.6-201ENST00000516831 118 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AC010306.1-201ENST00000523223 1117 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 OR4V1P-201ENST00000525394 1140 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.8□□□□□ -1.8
COL2A1P02458 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 AC135001.1-201ENST00000544546 283 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.8□□□□□ -1.8
COL2A1P02458 AL121603.1-201ENST00000553815 142 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.8□□□□□ -1.8
COL2A1P02458 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.8□□□□□ -1.8
COL2A1P02458 AC064872.1-201ENST00000604823 1072 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AC012213.4-201ENST00000606457 354 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 AC245297.2-201ENST00000610119 565 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 TUG1_1.1-201ENST00000610654 145 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AC100793.4-201ENST00000613683 429 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms