Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.75□□□□□ -1.33
RNF40O75150 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 AC093227.2-201ENST00000589357 285 ntBASIC6.75□□□□□ -1.33
RNF40O75150 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 BX284668.6-201ENST00000606899 438 ntBASIC6.75□□□□□ -1.33
RNF40O75150 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 AL450472.1-202ENST00000637286 180 ntBASIC6.75□□□□□ -1.33
RNF40O75150 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RNF40O75150 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 AC027088.4-201ENST00000611559 1947 ntBASIC6.75□□□□□ -1.33
RNF40O75150 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.75□□□□□ -1.33
RNF40O75150 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RNF40O75150 SHQ1P1-201ENST00000437111 1544 ntBASIC6.75□□□□□ -1.33
RNF40O75150 AL359976.1-201ENST00000418655 3528 ntBASIC6.75□□□□□ -1.33
RNF40O75150 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 AL731532.1-201ENST00000623972 4236 ntBASIC6.74□□□□□ -1.33
RNF40O75150 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF40O75150 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF40O75150 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 AC007342.5-201ENST00000571340 2142 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF40O75150 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RNF40O75150 AL391987.6-201ENST00000305671 199 ntBASIC6.74□□□□□ -1.33
RNF40O75150 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF40O75150 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.74□□□□□ -1.33
RNF40O75150 Y_RNA.83-201ENST00000363005 113 ntBASIC6.74□□□□□ -1.33
RNF40O75150 RNU6-393P-201ENST00000384475 107 ntBASIC6.74□□□□□ -1.33
RNF40O75150 MIR517A-201ENST00000385001 87 ntBASIC6.74□□□□□ -1.33
RNF40O75150 HMGB1P20-201ENST00000402555 677 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF40O75150 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC093106.2-201ENST00000428212 385 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF40O75150 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF40O75150 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC005094.1-201ENST00000440420 368 ntBASIC6.74□□□□□ -1.33
RNF40O75150 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF40O75150 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6.74□□□□□ -1.33
RNF40O75150 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF40O75150 AC098869.1-201ENST00000481627 292 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AP000648.1-201ENST00000529682 397 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AP004609.2-201ENST00000532177 190 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF40O75150 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF40O75150 AC025884.1-201ENST00000556034 378 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC106785.4-201ENST00000569492 412 ntBASIC6.74□□□□□ -1.33
RNF40O75150 AC004805.3-201ENST00000603178 310 ntBASIC6.74□□□□□ -1.33
RNF40O75150 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF40O75150 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF40O75150 AC021753.1-201ENST00000635724 168 ntBASIC6.74□□□□□ -1.33
RNF40O75150 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RNF40O75150 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RNF40O75150 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF40O75150 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
RNF40O75150 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 AC105235.1-201ENST00000623208 1816 ntBASIC6.73□□□□□ -1.33
RNF40O75150 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RNF40O75150 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 RN7SKP115-201ENST00000363177 317 ntBASIC6.73□□□□□ -1.33
RNF40O75150 GCNT1P4-201ENST00000404096 329 ntBASIC6.73□□□□□ -1.33
RNF40O75150 RNU6-174P-201ENST00000410406 106 ntBASIC6.73□□□□□ -1.33
RNF40O75150 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 AL353997.1-201ENST00000432936 108 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC110602.1-201ENST00000437414 318 ntBASIC6.73□□□□□ -1.33
RNF40O75150 RPEP5-201ENST00000441137 268 ntBASIC6.73□□□□□ -1.33
RNF40O75150 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 RPS3AP46-201ENST00000448352 682 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AL031274.1-201ENST00000450334 232 ntBASIC6.73□□□□□ -1.33
RNF40O75150 OR2AQ1P-201ENST00000451972 200 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC104073.1-201ENST00000451988 151 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF40O75150 RPL23AP31-201ENST00000456160 467 ntBASIC6.73□□□□□ -1.33
RNF40O75150 SNORD97-201ENST00000459187 142 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC018645.1-201ENST00000505003 109 ntBASIC6.73□□□□□ -1.33
RNF40O75150 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF40O75150 AC092436.3-201ENST00000511788 257 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 RNU7-4P-201ENST00000516961 62 ntBASIC6.73□□□□□ -1.33
RNF40O75150 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF40O75150 AC025423.5-201ENST00000550230 219 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.73□□□□□ -1.33
RNF40O75150 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 AC005341.1-201ENST00000571086 708 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AC233702.7-202ENST00000582941 211 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms