Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 HMGN1P24-201ENST00000412282 298 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB3O15347 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB3O15347 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB3O15347 PTP4A1P3-201ENST00000433661 420 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB3O15347 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB3O15347 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGB3O15347 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB3O15347 RPS29P12-201ENST00000460178 152 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB3O15347 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.39□□□□□ -2.03
HMGB3O15347 PCNAP1-201ENST00000505363 709 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 AC008565.1-201ENST00000509046 885 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB3O15347 RNU6-491P-201ENST00000516099 110 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 AL049874.4-201ENST00000557593 255 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB3O15347 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.39□□□□□ -2.03
HMGB3O15347 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGB3O15347 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGB3O15347 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGB3O15347 AC092474.3-201ENST00000603022 568 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 AC104785.1-201ENST00000603220 588 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 DUXAP3-201ENST00000603616 594 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.39□□□□□ -2.03
HMGB3O15347 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGB3O15347 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HMGB3O15347 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGB3O15347 ASNSP3-201ENST00000451989 1306 ntBASIC2.39□□□□□ -2.03
HMGB3O15347 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HMGB3O15347 AC138915.1-201ENST00000565427 1685 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HMGB3O15347 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB3O15347 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 RN7SKP220-201ENST00000410611 288 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 RNA5SP38-201ENST00000410750 119 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.38□□□□□ -2.03
HMGB3O15347 AL451074.5-201ENST00000415894 435 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 OFD1P18Y-201ENST00000420889 959 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB3O15347 AL445528.1-201ENST00000426330 420 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 BRWD1P3-201ENST00000428816 390 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB3O15347 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 NOTCH2P1-201ENST00000443481 624 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 RPS26P56-201ENST00000444468 240 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGB3O15347 HMGB1P3-201ENST00000502802 616 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC004062.1-201ENST00000509926 645 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB3O15347 RPL7L1P13-201ENST00000511702 739 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 RNA5SP76-201ENST00000516277 87 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB3O15347 FAM60DP-201ENST00000524174 632 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HMGB3O15347 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 MIR3605-201ENST00000583214 100 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGB3O15347 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.38□□□□□ -2.03
HMGB3O15347 AC022916.3-201ENST00000592961 742 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB3O15347 AL590392.1-201ENST00000604960 446 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AL133507.1-201ENST00000605269 557 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC008083.4-201ENST00000615076 444 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 AC018755.4-201ENST00000619715 454 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGB3O15347 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGB3O15347 ZNF285B-201ENST00000561698 1767 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 OR5BR1P-201ENST00000524992 1330 ntBASIC2.38□□□□□ -2.03
HMGB3O15347 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB3O15347 MTND4P8-201ENST00000514997 1362 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.37□□□□□ -2.03
HMGB3O15347 MIR26A1-201ENST00000362205 77 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 SNORD56.5-201ENST00000364281 72 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 MIR181A2-201ENST00000384863 110 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 RNA5SP56-201ENST00000410277 118 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 AL606495.1-201ENST00000422100 813 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AL513175.1-201ENST00000431492 780 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 RPL7P29-201ENST00000437151 728 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.37□□□□□ -2.03
HMGB3O15347 CDC27P1-201ENST00000445384 715 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.37□□□□□ -2.03
HMGB3O15347 RBMY2UP-201ENST00000453474 324 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HMGB3O15347 NDUFA5P9-201ENST00000472609 340 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 SEM1P1-201ENST00000506694 209 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC009901.1-201ENST00000506703 541 ntBASIC2.37□□□□□ -2.03
HMGB3O15347 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms