Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHANK2Q9UPX8 MIR181B1-201ENST00000385240 110 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AC080125.1-201ENST00000414888 684 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AL135786.1-201ENST00000415892 214 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 RPLP0P7-201ENST00000416050 667 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 FCF1P1-201ENST00000432690 571 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AC092013.1-201ENST00000438795 332 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 FAM103A2P-201ENST00000444122 354 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AC138915.3-201ENST00000562908 1389 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 AC092881.1-201ENST00000638218 2733 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 DCAF13P3-201ENST00000561147 1334 ntBASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHANK2Q9UPX8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 Y_RNA.164-201ENST00000363709 102 ntBASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 AL590004.2-201ENST00000404787 371 ntBASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 RPL21P99-201ENST00000480369 423 ntBASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 GAPDHP39-201ENST00000481866 979 ntBASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 RNA5SP445-201ENST00000515889 115 ntBASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 AC079228.1-201ENST00000624774 1049 ntBASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.87□□□□□ -1.79
SHANK2Q9UPX8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC019155.1-201ENST00000382242 574 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 MRPL50P4-201ENST00000446432 475 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AL162388.1-201ENST00000450912 352 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 CKS1BP2-201ENST00000497342 240 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AL133271.1-201ENST00000538229 291 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC080128.1-201ENST00000474389 1917 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 MIR27B-201ENST00000385129 97 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 MTCO1P39-201ENST00000426148 480 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC021146.5-201ENST00000503544 545 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 OR4A45P-201ENST00000529954 901 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 AC016727.1-205ENST00000605437 569 ntBASIC3.86□□□□□ -1.79
SHANK2Q9UPX8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 SYT14P1-202ENST00000600441 1448 ntBASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 Y_RNA.118-201ENST00000363300 101 ntBASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 OR6K1P-201ENST00000456766 971 ntBASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 YWHAZP1-201ENST00000556286 722 ntBASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.85□□□□□ -1.79
SHANK2Q9UPX8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHANK2Q9UPX8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHANK2Q9UPX8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.84□□□□□ -1.79
SHANK2Q9UPX8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.84□□□□□ -1.79
SHANK2Q9UPX8 RNVU1-3-201ENST00000364313 161 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 RPS15AP6-201ENST00000420703 385 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 SEPT7P6-201ENST00000469999 1143 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 AC016687.1-201ENST00000482574 353 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 OR8L1P-201ENST00000534005 955 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 AL391156.1-201ENST00000554965 554 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 AC022069.1-201ENST00000582910 658 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 AL450489.1-201ENST00000612071 468 ntBASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHANK2Q9UPX8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHANK2Q9UPX8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms