Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNRPGP5-201ENST00000456003 220 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 MTCYBP17-201ENST00000503579 789 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 RN7SKP298-201ENST00000515950 94 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 NRON-201ENST00000517270 370 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AL133241.1-201ENST00000556832 487 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 ZNF519P2-201ENST00000557032 169 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AC009063.1-201ENST00000563342 702 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 RPL12P25-202ENST00000598100 674 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AL606834.2-201ENST00000602954 668 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AP000403.1-201ENST00000603349 851 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AL109618.2-201ENST00000605527 211 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AP001521.1-201ENST00000609150 300 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AP005019.3-201ENST00000620418 560 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 OR4G11P-202ENST00000642116 1414 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AC006971.1-201ENST00000407916 4486 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 OR4G2P-201ENST00000328113 903 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 SNRPEP3-201ENST00000338402 276 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RNU5F-6P-201ENST00000362979 116 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RNU1-83P-201ENST00000363426 164 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RNU5F-7P-201ENST00000363696 115 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RNU6-1283P-201ENST00000365314 105 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 Y_RNA.582-201ENST00000391023 95 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL592291.1-201ENST00000403830 352 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 OR8G2P-201ENST00000412796 908 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC083875.1-201ENST00000419509 405 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RPEP3-201ENST00000425462 676 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 ISCA1P1-201ENST00000426679 387 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 RBMX2P4-201ENST00000441256 376 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 FGF7P6-202ENST00000451282 293 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 HMGN3P1-201ENST00000453847 193 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC004924.1-201ENST00000480160 781 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC013828.1-201ENST00000481845 158 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MTAPP1-201ENST00000489154 819 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC006499.2-201ENST00000513470 337 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC234778.2-201ENST00000566241 354 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC015912.2-201ENST00000571053 181 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MIR548AB-201ENST00000584917 84 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC068790.5-201ENST00000602741 355 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC103792.1-201ENST00000603591 919 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC005191.1-201ENST00000603950 358 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC112187.2-201ENST00000604345 283 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MIR92B-201ENST00000607575 96 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AC231657.1-201ENST00000624313 397 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL603839.4-201ENST00000624658 1005 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 AL391684.1-202ENST00000641293 1636 ntBASIC4.6□□□□□ -1.67
DKK3Q9UBP4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
DKK3Q9UBP4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 MFSD8-242ENST00000641690 4199 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 ELOCP19-201ENST00000411919 318 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.59□□□□□ -1.67
DKK3Q9UBP4 ZYG11AP1-201ENST00000430329 837 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.59□□□□□ -1.67
DKK3Q9UBP4 TDGF1P1-201ENST00000445734 527 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms