Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHRF1Q9P1Y6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 MIR181B1-201ENST00000385240 110 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AL079342.1-201ENST00000401460 267 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 RNU4-26P-201ENST00000410270 107 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 GAPDHP39-201ENST00000481866 979 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 RN7SKP24-201ENST00000515888 284 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AP000857.1-201ENST00000532151 543 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AC055876.1-202ENST00000567053 138 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AC010620.2-201ENST00000600135 313 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 MIR7111-201ENST00000619751 72 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AC004925.1-201ENST00000624256 2706 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 HMGN1P5-201ENST00000448591 263 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 RPL36AP51-201ENST00000487216 318 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AP000867.2-201ENST00000532468 320 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AL137072.1-201ENST00000603444 466 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 AC007938.3-201ENST00000604965 623 ntBASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHRF1Q9P1Y6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.86
PHRF1Q9P1Y6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 AC126182.1-201ENST00000478134 357 ntBASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 AC016687.1-201ENST00000482574 353 ntBASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 AL450489.1-201ENST00000612071 468 ntBASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PHRF1Q9P1Y6 AC087565.3-202ENST00000642085 1603 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 GTF2H2B-203ENST00000508065 1432 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 EI24P2-201ENST00000397776 1076 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AL590004.2-201ENST00000404787 371 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AL356806.1-201ENST00000422524 916 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 FAM103A2P-201ENST00000444122 354 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AC068305.1-201ENST00000497406 726 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 NPM1P35-201ENST00000533043 868 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 OR8L1P-201ENST00000534005 955 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 AL133271.1-201ENST00000538229 291 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
PHRF1Q9P1Y6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 MIR137-201ENST00000385223 102 ntBASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 AL355379.1-201ENST00000405542 640 ntBASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 MIR1273D-201ENST00000577266 86 ntBASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 AC095050.2-201ENST00000510748 1458 ntBASIC3.38□□□□□ -1.87
PHRF1Q9P1Y6 OR10AB1P-202ENST00000641219 1686 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AL512633.1-201ENST00000399931 655 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 TRGV5P-201ENST00000419915 354 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 OR2B8P-201ENST00000432841 938 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 MRPL50P4-201ENST00000446432 475 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 ST13P20-201ENST00000447996 1065 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 RPL9P32-201ENST00000464118 620 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AC107015.1-201ENST00000466902 747 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AP000893.1-201ENST00000474462 794 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 RN7SL297P-201ENST00000483161 293 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 RNU6-548P-201ENST00000517083 115 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 IGKV2-36-201ENST00000519999 223 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 NTAN1P1-201ENST00000603150 646 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 AC068313.1-201ENST00000604028 1008 ntBASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PHRF1Q9P1Y6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms