Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PRDM9Q9NQV7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.17□□□□□ -1.42
PRDM9Q9NQV7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PRDM9Q9NQV7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 Z75746.1-201ENST00000440243 2080 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC105235.1-201ENST00000623208 1816 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AL136531.3-201ENST00000624378 3658 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 Y_RNA.304-201ENST00000365011 112 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 Y_RNA.458-201ENST00000384240 102 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 MIR191-201ENST00000384873 92 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 BX842559.1-201ENST00000419615 532 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 NME1P1-201ENST00000420914 382 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC073063.1-201ENST00000434352 607 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AP000936.3-201ENST00000438127 255 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC127537.2-201ENST00000439258 465 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 GAPDHP27-201ENST00000447427 1020 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC099670.1-201ENST00000455141 783 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 MRPL42P6-201ENST00000486397 371 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC074198.2-201ENST00000508153 258 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC007016.1-201ENST00000512110 244 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 RNU6-479P-201ENST00000516348 105 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC092470.1-201ENST00000546187 132 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 CPDP1-201ENST00000579660 283 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC004805.3-201ENST00000603178 310 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC091193.1-201ENST00000604640 448 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 LINC02555-201ENST00000563933 1951 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 AC022905.1-201ENST00000503430 3048 ntBASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRDM9Q9NQV7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC140479.2-201ENST00000421567 3130 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 RNU4-44P-201ENST00000363050 141 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 Y_RNA.581-201ENST00000391017 97 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 RNU6-700P-201ENST00000391043 107 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 U3.29-201ENST00000391296 212 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AL451136.1-201ENST00000435399 325 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms