Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 CR381670.1-201ENST00000624291 1693 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 RNU1-33P-201ENST00000364249 162 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 RNU6-575P-201ENST00000411326 105 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 RPL30P2-201ENST00000414021 291 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC233981.1-201ENST00000423224 461 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 HIGD1AP12-201ENST00000427832 281 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 CKS1BP5-201ENST00000434172 273 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL590399.6-201ENST00000446396 307 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 Z99714.1-201ENST00000450463 807 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 HMGN3P1-201ENST00000453847 193 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 NF1P3-201ENST00000457709 450 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 TRBV12-2-201ENST00000489763 344 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AP000563.1-201ENST00000490865 758 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC109471.1-201ENST00000511631 612 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC006116.7-201ENST00000590141 756 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL163642.2-201ENST00000604722 1019 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC006077.1-201ENST00000604746 343 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL160281.1-201ENST00000605307 311 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL355365.1-201ENST00000616480 294 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 VN1R7P-201ENST00000619242 903 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AP003476.1-201ENST00000623984 516 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AL138960.2-201ENST00000625145 535 ntBASIC3.72□□□□□ -1.81
HPS4Q9NQG7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
HPS4Q9NQG7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HPS4Q9NQG7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 RNU6-441P-201ENST00000384545 106 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 MTND4P22-201ENST00000413116 1169 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC127526.1-201ENST00000417526 366 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 BX842559.1-201ENST00000419615 532 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 RPL26P28-201ENST00000451325 435 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 RN7SL601P-201ENST00000471221 293 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 SUMO2P20-201ENST00000520803 283 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 IGHV3-76-201ENST00000522465 295 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AP001207.1-201ENST00000524051 481 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 OR4R3P-201ENST00000525084 838 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AP003102.1-201ENST00000525638 661 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 OR8K4P-201ENST00000534608 872 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 MIR3690-201ENST00000580266 75 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 ZNF415P1-201ENST00000582279 1166 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 BNIP3P31-201ENST00000604515 566 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AP002802.2-201ENST00000605877 235 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AL133445.2-201ENST00000611191 527 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC069209.1-201ENST00000619282 651 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AP001002.2-201ENST00000625137 386 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC126544.2-201ENST00000625174 749 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 MAPK10-362ENST00000641864 4484 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS4Q9NQG7 MTND5P31-201ENST00000419366 1374 ntBASIC3.71□□□□□ -1.82
HPS4Q9NQG7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms