Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC245166.1-201ENST00000521012 253 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 MTND5P28-201ENST00000438005 1594 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 BX005019.1-201ENST00000561881 1810 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 RNU6-661P-201ENST00000362409 107 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 RN7SKP285-201ENST00000410137 318 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 FCF1P1-201ENST00000432690 571 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 AC011753.1-201ENST00000451001 220 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 AL024509.2-201ENST00000493462 493 ntBASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD1Q96PZ7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AL024474.1-201ENST00000404655 591 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 RNA5SP107-201ENST00000411358 122 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 RHEBP3-201ENST00000411920 351 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC107081.1-201ENST00000414975 361 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 ELOCP13-201ENST00000443934 329 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC006539.3-201ENST00000454258 129 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 SRIP1-201ENST00000489235 288 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 RPS26P30-201ENST00000443431 335 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 LTV1P1-201ENST00000510683 1237 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC107222.1-201ENST00000510899 637 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AL512646.1-201ENST00000269395 1077 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 SNORA26.9-201ENST00000391322 122 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 LAP3P1-201ENST00000403648 294 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC006960.1-201ENST00000419980 153 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC112220.1-201ENST00000434628 355 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AP004217.1-201ENST00000480579 346 ntBASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.14□□□□□ -2.07
CSMD1Q96PZ7 AC109315.1-201ENST00000584143 1347 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AL353729.1-201ENST00000425044 720 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 NIPA2P2-201ENST00000496376 1083 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 NR1H5P-201ENST00000452683 1377 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 SNORD62.1-201ENST00000362541 86 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 SKINT1L-201ENST00000401057 817 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 PPIAP17-201ENST00000438507 471 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC068587.2-201ENST00000478386 781 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 TTC39DP-201ENST00000416781 1688 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 GSTA9P-201ENST00000406231 611 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AL583834.1-201ENST00000406943 343 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 RPL31P12-201ENST00000422587 358 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC108667.1-201ENST00000428618 249 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AP001086.1-201ENST00000494882 321 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC118282.1-201ENST00000506408 765 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AC119751.1-201ENST00000513357 765 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 CR381653.2-201ENST00000624041 768 ntBASIC2.13□□□□□ -2.07
CSMD1Q96PZ7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.12□□□□□ -2.07
CSMD1Q96PZ7 RNU6-805P-201ENST00000365643 106 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms