Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL358794.1-201ENST00000445689 381 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC069540.1-201ENST00000446320 988 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 RPL7P55-201ENST00000450522 746 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC005912.1-201ENST00000495392 255 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC021087.2-201ENST00000504656 1203 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 FABP5P6-201ENST00000510588 409 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC005798.1-201ENST00000513715 387 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 HMGB1P46-201ENST00000520062 610 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 MIR4716-201ENST00000579628 84 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC006557.5-201ENST00000603126 811 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNED1Q8TER0 uc_338.9-201ENST00000617424 182 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 AC139769.3-201ENST00000618383 175 ntBASIC4.08□□□□□ -1.76
SNED1Q8TER0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNED1Q8TER0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNED1Q8TER0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SNED1Q8TER0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 RAD1P1-201ENST00000231383 813 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 MIR422A-201ENST00000362286 90 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 UBE2V1P2-201ENST00000397758 440 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 FO393414.1-201ENST00000428697 1184 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC006028.1-201ENST00000438379 402 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 RN7SL863P-201ENST00000462370 296 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC008083.2-201ENST00000546707 476 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AL121576.1-201ENST00000556055 276 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC084757.1-201ENST00000559987 490 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC099489.2-201ENST00000574976 260 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AL158042.1-201ENST00000605338 460 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC013562.2-201ENST00000611632 603 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC100793.4-201ENST00000613683 429 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC110801.1-201ENST00000623590 212 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC083865.1-201ENST00000636634 831 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 AC000123.3-201ENST00000624029 4975 ntBASIC4.07□□□□□ -1.76
SNED1Q8TER0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SNED1Q8TER0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SNED1Q8TER0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 RNU5B-4P-201ENST00000363508 111 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 RPL5P18-201ENST00000406671 891 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 Z99755.1-201ENST00000414048 380 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AL353678.1-201ENST00000422735 741 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 NPM1P24-201ENST00000428039 894 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 SKP1P1-201ENST00000438081 489 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 MUPP-201ENST00000438111 566 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 Z99127.2-201ENST00000441426 334 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC239809.1-201ENST00000450470 217 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 ZNF886P-201ENST00000450781 723 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SNED1Q8TER0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 RPS3AP50-201ENST00000487064 803 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 MRPS36P3-201ENST00000519284 130 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.06□□□□□ -1.76
SNED1Q8TER0 LRRC6P1-201ENST00000532188 885 ntBASIC4.06□□□□□ -1.76
SNED1Q8TER0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms