Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 PAXBP1P1-201ENST00000449315 447 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 TRBV26-201ENST00000456572 344 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC087879.1-201ENST00000474343 374 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC017015.1-201ENST00000477387 286 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC107401.1-201ENST00000503426 685 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 PRELID3BP7-201ENST00000503606 469 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 MTND1P5-201ENST00000517906 940 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 IGHV3-32-201ENST00000519182 355 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AP003392.2-201ENST00000527269 208 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AL139174.1-201ENST00000531489 886 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 ZNF519P3-201ENST00000557158 1032 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 HSPE1P3-201ENST00000559254 309 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC091489.2-201ENST00000566263 604 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC018552.3-201ENST00000567416 561 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 BNIP3P23-201ENST00000599655 511 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 NDUFA8P1-201ENST00000605525 367 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC018695.5-201ENST00000605872 315 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 Z99129.1-201ENST00000612510 255 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 AL391261.4-201ENST00000616012 481 ntBASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
SMC1BQ8NDV3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC100778.3-201ENST00000580060 1750 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MTND5P28-201ENST00000438005 1594 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 Y_RNA.3-201ENST00000362331 103 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 RNU6-1293P-201ENST00000384077 107 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MIR320C1-201ENST00000408566 88 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 RN7SKP33-201ENST00000410942 340 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 RPL7P30-201ENST00000420888 709 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC104333.2-201ENST00000422630 192 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 ARPC3P5-201ENST00000448802 534 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC026410.2-201ENST00000460281 156 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MTND6P6-201ENST00000478031 263 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC005726.1-201ENST00000494679 427 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC106872.3-201ENST00000495104 446 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 BNIP3P41-201ENST00000503774 571 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 POU5F1P7-201ENST00000508759 541 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 OR6C73P-201ENST00000546432 358 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MTND1P15-201ENST00000579262 949 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MIR548AB-201ENST00000584917 84 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC005771.1-201ENST00000585581 349 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC091805.2-201ENST00000603848 235 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 PRELID3BP8-201ENST00000604148 295 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC107304.1-201ENST00000604229 296 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC103710.4-201ENST00000609301 899 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC138932.5-201ENST00000617759 563 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 MIR6864-201ENST00000617935 70 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 RNU6-156P-201ENST00000621869 107 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 U6.101-201ENST00000637707 76 ntBASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.34□□□□□ -1.55
SMC1BQ8NDV3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMC1BQ8NDV3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
SMC1BQ8NDV3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SMC1BQ8NDV3 AC092447.7-201ENST00000422212 1621 ntBASIC5.34□□□□□ -1.56
SMC1BQ8NDV3 LINC01355-201ENST00000566551 5444 ntBASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms