Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL136295.6-201ENST00000610486 658 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 Mico1.1-201ENST00000611698 204 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC079684.1-201ENST00000621405 437 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AP000553.6-201ENST00000641242 118 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC116096.1-201ENST00000566804 2314 ntBASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC71LQ8N9Z2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC058791.1-201ENST00000608412 3198 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RNA5SP130-201ENST00000364431 114 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-335P-201ENST00000364563 113 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RNU6-657P-201ENST00000383904 107 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 Y_RNA.472-201ENST00000384322 102 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AL590704.1-201ENST00000402856 794 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 MIR1250-201ENST00000408098 113 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 OR4K6P-201ENST00000416478 897 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 TOMM22P1-201ENST00000418578 312 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AL513174.1-201ENST00000423182 629 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RPS3AP46-201ENST00000448352 682 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC010468.1-201ENST00000461022 817 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RPL7P5-201ENST00000471472 736 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC010301.1-201ENST00000473936 355 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC092185.1-201ENST00000491371 97 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 FCF1P3-201ENST00000496394 590 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC020893.1-201ENST00000502452 580 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC002456.2-201ENST00000509356 380 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 FABP5P12-201ENST00000515543 389 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 SNORA48.10-201ENST00000516965 160 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 MTND1P8-201ENST00000571424 950 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 RN7SL600P-201ENST00000581811 299 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 ARF4P1-201ENST00000605447 541 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC024940.4-201ENST00000605507 246 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 MIR7703-201ENST00000620784 77 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AL732618.1-201ENST00000623251 301 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC110801.1-201ENST00000623590 212 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 AC004925.1-201ENST00000624256 2706 ntBASIC3.03□□□□□ -1.92
CCDC71LQ8N9Z2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC073073.2-201ENST00000609827 2578 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 MAPK10-362ENST00000641864 4484 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 HMGB1P5-201ENST00000255320 642 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU1-75P-201ENST00000347264 129 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-492P-201ENST00000363035 104 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU4-51P-201ENST00000364206 140 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNA5SP42-201ENST00000364278 115 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU6-707P-201ENST00000364647 95 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SAR1AP2-201ENST00000392696 594 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 TMSB4XP8-201ENST00000402089 135 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL023807.1-201ENST00000407932 359 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 HMGB3P23-201ENST00000414981 585 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 TMSB4XP6-201ENST00000415187 135 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC092634.6-201ENST00000418558 192 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 MTCO3P1-205ENST00000422088 832 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 NANOGP5-201ENST00000424456 877 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 TMSB4XP1-201ENST00000424567 135 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 MTCO1P3-201ENST00000429327 192 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 GOT2P5-201ENST00000433995 546 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 SEPT7P5-201ENST00000434048 306 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC092393.1-201ENST00000439625 742 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC112492.1-201ENST00000449607 712 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 AC091179.1-201ENST00000461606 579 ntBASIC3.02□□□□□ -1.93
CCDC71LQ8N9Z2 RPS29P22-201ENST00000472363 168 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms