Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC011755.1-201ENST00000623763 2049 ntBASIC5.09□□□□□ -1.6
SYNPOQ8N3V7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.09□□□□□ -1.6
SYNPOQ8N3V7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SYNPOQ8N3V7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SYNPOQ8N3V7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.6
SYNPOQ8N3V7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
SYNPOQ8N3V7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RNU4-12P-201ENST00000365233 139 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 U3.15-201ENST00000365398 212 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 SNORA20.2-201ENST00000383922 131 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RPL17P50-201ENST00000396131 546 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 ELOCP4-201ENST00000420090 333 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AC092832.1-201ENST00000422934 400 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RPL18P10-201ENST00000425606 538 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 DPPA2P1-201ENST00000428060 556 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 NRBF2P3-201ENST00000432731 865 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AC092162.1-201ENST00000432828 434 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 Z99127.3-201ENST00000448158 395 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 PSPHP1-201ENST00000450062 261 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AURKAPS2-201ENST00000454983 333 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 SNORD121B-201ENST00000458838 81 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RN7SL814P-201ENST00000487715 300 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AC007182.2-201ENST00000489251 402 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 TMEM248P1-201ENST00000510579 951 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RN7SKP92-201ENST00000517266 244 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 FAM92A1P1-201ENST00000528023 890 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 MED28P5-201ENST00000528254 438 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 PARP1P2-201ENST00000556806 195 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 PRPF19P1-201ENST00000584766 898 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 RPL26P30-202ENST00000602923 645 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 AC010680.3-201ENST00000604215 520 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 U4.5-201ENST00000617137 123 ntBASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SYNPOQ8N3V7 ELF2P3-201ENST00000445099 1506 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 OR4K15-201ENST00000305051 1216 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 SNORA2.3-201ENST00000383920 135 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RNU6-278P-201ENST00000390945 109 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AL590002.1-201ENST00000406554 418 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RPL12P9-201ENST00000412942 488 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 OR2AH1P-201ENST00000425717 928 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC073464.1-201ENST00000429823 534 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 MRPS18BP2-201ENST00000434310 759 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC093414.1-201ENST00000434712 514 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RPL12P18-201ENST00000437175 325 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RPS29P9-201ENST00000440360 171 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 H2AFZP5-201ENST00000446960 382 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 TPT1P14-201ENST00000448018 505 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RPS3AP14-201ENST00000483907 780 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 ENPP7P11-201ENST00000505915 627 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 RN7SKP276-201ENST00000516242 268 ntBASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.07□□□□□ -1.6
SYNPOQ8N3V7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms