Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KNOP1P3-201ENST00000446933 426 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC090804.1-201ENST00000448870 490 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AP1S2P1-201ENST00000457344 379 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC093767.1-201ENST00000504523 156 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC139783.2-201ENST00000504847 1145 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC010350.1-201ENST00000504908 231 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 RN7SL802P-201ENST00000577858 299 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 MIR4436B2-201ENST00000581415 91 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 MIR4436B1-201ENST00000583272 91 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC115621.1-201ENST00000604653 858 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC133644.2-201ENST00000608142 540 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC079597.1-201ENST00000624306 508 ntBASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM48Q8IWZ4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 AL731532.2-201ENST00000623542 1953 ntBASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 AC104260.2-201ENST00000623551 3497 ntBASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM48Q8IWZ4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 MTND5P33-201ENST00000571250 1450 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 RNU6-1120P-201ENST00000362988 108 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 RNA5SP123-201ENST00000363244 119 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 RNU6-1207P-201ENST00000384343 107 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL133270.1-201ENST00000402635 279 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL807761.1-201ENST00000417622 171 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC092832.1-201ENST00000422934 400 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 EIF1P3-201ENST00000423841 334 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 COX6CP15-201ENST00000426313 211 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC007677.1-201ENST00000445757 515 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC012512.1-201ENST00000446594 718 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL354714.3-201ENST00000447284 493 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 snoU13.7-201ENST00000459220 104 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 TXNP6-201ENST00000510190 310 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 Y_RNA.701-201ENST00000516812 110 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AP000859.1-201ENST00000525536 307 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 PHBP17-201ENST00000528576 541 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 BRD9P1-201ENST00000529855 560 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AP000907.2-201ENST00000530827 353 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 EDDM3DP-201ENST00000554692 434 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 RPL26P30-202ENST00000602923 645 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC064836.2-201ENST00000609491 462 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL356585.4-201ENST00000623078 1229 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC005858.4-201ENST00000623191 700 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AC100810.6-201ENST00000638068 285 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 AL157700.1-201ENST00000561973 1432 ntBASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM48Q8IWZ4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM48Q8IWZ4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM48Q8IWZ4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM48Q8IWZ4 RNU6-845P-201ENST00000362578 103 ntBASIC4.95□□□□□ -1.62
TRIM48Q8IWZ4 RNU6-223P-201ENST00000362830 107 ntBASIC4.95□□□□□ -1.62
TRIM48Q8IWZ4 Y_RNA.72-201ENST00000362894 103 ntBASIC4.95□□□□□ -1.62
TRIM48Q8IWZ4 MIR1-2-201ENST00000384961 85 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms