Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 Y_RNA.135-201ENST00000363439 95 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 RNU5E-8P-201ENST00000363502 116 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 Y_RNA.257-201ENST00000364596 102 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 Y_RNA.373-201ENST00000365600 103 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 SET-203ENST00000372688 801 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 RNU6-209P-201ENST00000384118 107 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 SNORD37.1-201ENST00000390968 65 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 RNA5SP339-201ENST00000390987 122 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 MRPL42P3-201ENST00000401492 326 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 MIR548F5-201ENST00000408421 86 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 RNU2-28P-201ENST00000410457 189 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 MTATP6P29-201ENST00000415057 132 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 SLC25A18P1-201ENST00000449385 454 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 AZGP1P2-201ENST00000454506 345 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 APOOP2-201ENST00000461561 539 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 FAM206BP-201ENST00000510179 541 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 Y_RNA.665-201ENST00000516177 98 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC090572.1-201ENST00000519251 160 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 RPL7P20-201ENST00000520308 745 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 HIGD1AP6-201ENST00000521833 279 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 AC133644.2-201ENST00000608142 540 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 OR10AB1P-201ENST00000609613 938 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 MIR6810-201ENST00000622701 70 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 OR4F13P-202ENST00000560066 2054 ntBASIC5.66□□□□□ -1.5
RNF43Q68DV7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RNF43Q68DV7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF43Q68DV7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC114546.3-201ENST00000623582 1734 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 VPS35P1-201ENST00000563400 1518 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC104118.1-201ENST00000607625 1589 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AL049780.3-201ENST00000624612 1583 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 Y_RNA.527-201ENST00000384573 102 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 RNU1-77P-201ENST00000390868 162 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 FAM103A2P-201ENST00000444122 354 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC073415.1-201ENST00000449240 153 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AL356010.1-201ENST00000456364 102 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC021205.1-201ENST00000468797 348 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 CEACAMP10-202ENST00000495431 496 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC098591.2-201ENST00000510152 315 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 OR51K1P-201ENST00000510214 950 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC098976.1-201ENST00000513014 541 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 RNU4-29P-201ENST00000515943 174 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 RNU6-714P-201ENST00000516963 103 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC122688.1-201ENST00000541494 223 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC068831.4-201ENST00000556118 109 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC006363.1-201ENST00000603806 463 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF43Q68DV7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 AC091953.2-201ENST00000623979 160 ntBASIC5.65□□□□□ -1.5
RNF43Q68DV7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF43Q68DV7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.65□□□□□ -1.51
RNF43Q68DV7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF43Q68DV7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.65□□□□□ -1.51
RNF43Q68DV7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
RNF43Q68DV7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF43Q68DV7 MTND5P10-201ENST00000603719 1809 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms