Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PRPF38BQ5VTL8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
PRPF38BQ5VTL8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 MAPK10-323ENST00000641493 3207 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-1284P-201ENST00000363701 100 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RN7SKP227-201ENST00000364445 330 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 Y_RNA.399-201ENST00000383955 105 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-637P-201ENST00000384050 107 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 Y_RNA.447-201ENST00000384184 113 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-434P-201ENST00000384376 107 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-713P-201ENST00000384761 107 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-823P-201ENST00000391042 103 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU11-4P-201ENST00000391149 133 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 U3.29-201ENST00000391296 212 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AL096829.1-201ENST00000413677 457 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RPL7P37-201ENST00000425095 738 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 CYCSP6-201ENST00000434498 302 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AL353597.2-202ENST00000434901 373 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC114728.1-201ENST00000488289 483 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC026826.1-201ENST00000493002 361 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC095057.1-201ENST00000507583 168 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC106800.3-201ENST00000511389 308 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC026371.1-201ENST00000551867 419 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC020765.1-201ENST00000604296 328 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC020633.1-201ENST00000468439 2247 ntBASIC6.52□□□□□ -1.37
PRPF38BQ5VTL8 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AL606537.1-201ENST00000607258 2011 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-874P-201ENST00000362390 105 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 Y_RNA.39-201ENST00000362620 98 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 RNU4-2-201ENST00000365668 141 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 RNU6-1062P-201ENST00000383908 107 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 RNU2-23P-201ENST00000410545 195 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 SNRPCP2-201ENST00000504370 475 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 SNORA70.11-201ENST00000515987 138 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 SNORA70.13-201ENST00000516116 138 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 MIR4284-201ENST00000578924 81 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 AL355297.3-201ENST00000604082 446 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PRPF38BQ5VTL8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms