Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RAD1P1-201ENST00000231383 813 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 RNU6-40P-201ENST00000384254 107 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 MIR34A-201ENST00000385130 110 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AL360182.1-201ENST00000397433 468 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCH1Q13635 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC105402.2-201ENST00000438503 358 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCH1Q13635 RPS3P1-201ENST00000456781 192 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 PRELID3BP7-201ENST00000503606 469 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.12□□□□□ -1.75
PTCH1Q13635 RNU4-29P-201ENST00000515943 174 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC015871.2-201ENST00000603605 948 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AL035413.2-201ENST00000604801 525 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PTCH1Q13635 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTCH1Q13635 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTCH1Q13635 RPL31P12-201ENST00000422587 358 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 TOMM20P4-201ENST00000427861 435 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AC087499.2-201ENST00000432861 149 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 NIPA2P5-201ENST00000452282 464 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 MTND3P4-201ENST00000453537 303 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 CYCSP20-201ENST00000473154 315 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 OR4C2P-201ENST00000530855 1064 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC010680.4-201ENST00000605334 543 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC243829.7-201ENST00000633081 225 ntBASIC4.12□□□□□ -1.75
PTCH1Q13635 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.12□□□□□ -1.75
PTCH1Q13635 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PTCH1Q13635 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTCH1Q13635 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 RNU6-859P-201ENST00000362728 107 ntBASIC4.11□□□□□ -1.75
PTCH1Q13635 U3.15-201ENST00000365398 212 ntBASIC4.11□□□□□ -1.75
PTCH1Q13635 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTCH1Q13635 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTCH1Q13635 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 CCNB2P1-201ENST00000399411 1150 ntBASIC4.11□□□□□ -1.75
PTCH1Q13635 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 RN7SL20P-201ENST00000488827 297 ntBASIC4.11□□□□□ -1.75
PTCH1Q13635 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTCH1Q13635 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCH1Q13635 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PTCH1Q13635 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
PTCH1Q13635 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
PTCH1Q13635 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.11□□□□□ -1.75
PTCH1Q13635 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.11□□□□□ -1.75
PTCH1Q13635 AC026790.2-201ENST00000606282 430 ntBASIC4.11□□□□□ -1.75
PTCH1Q13635 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.1□□□□□ -1.75
PTCH1Q13635 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCH1Q13635 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTCH1Q13635 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCH1Q13635 DCAF13P3-201ENST00000561147 1334 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 SNORD115-48-201ENST00000364764 76 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PTCH1Q13635 MIR887-201ENST00000401258 79 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTCH1Q13635 AC004022.2-201ENST00000413824 193 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 MTND4LP14-201ENST00000429447 288 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
PTCH1Q13635 AL645939.1-201ENST00000453429 797 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AL136097.1-201ENST00000456945 913 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 snoU13.26-201ENST00000459452 105 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AC111000.2-201ENST00000507775 550 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 FABP5P12-201ENST00000515543 389 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AP001207.2-201ENST00000519490 539 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.1□□□□□ -1.75
PTCH1Q13635 AP000916.1-201ENST00000533869 835 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AC025260.1-201ENST00000548858 430 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AC096947.1-201ENST00000603233 470 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AC069304.3-201ENST00000603938 1084 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 AL162233.1-201ENST00000620014 944 ntBASIC4.1□□□□□ -1.75
PTCH1Q13635 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
PTCH1Q13635 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 AC022031.1-201ENST00000585985 2593 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PTCH1Q13635 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.09□□□□□ -1.75
PTCH1Q13635 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PTCH1Q13635 AC025125.1-201ENST00000624743 1922 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PTCH1Q13635 RN7SKP44-201ENST00000363602 316 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 MIR124-3-201ENST00000384866 87 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 MIR9-1-201ENST00000385198 89 ntBASIC4.09□□□□□ -1.75
PTCH1Q13635 AC110754.1-201ENST00000399740 601 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms