Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 OR4R3P-201ENST00000525084 838 ntBASIC3.26□□□□□ -1.89
LIM2P55344 AC019227.1-201ENST00000526902 510 ntBASIC3.26□□□□□ -1.89
LIM2P55344 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.26□□□□□ -1.89
LIM2P55344 LSM6P2-201ENST00000552208 177 ntBASIC3.26□□□□□ -1.89
LIM2P55344 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.26□□□□□ -1.89
LIM2P55344 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.26□□□□□ -1.89
LIM2P55344 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.26□□□□□ -1.89
LIM2P55344 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.26□□□□□ -1.89
LIM2P55344 AC004825.2-201ENST00000616634 455 ntBASIC3.26□□□□□ -1.89
LIM2P55344 MFSD8-245ENST00000641743 948 ntBASIC3.26□□□□□ -1.89
LIM2P55344 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
LIM2P55344 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LIM2P55344 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIM2P55344 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIM2P55344 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIM2P55344 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.25□□□□□ -1.89
LIM2P55344 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.25□□□□□ -1.89
LIM2P55344 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.25□□□□□ -1.89
LIM2P55344 AC245052.5-201ENST00000416320 649 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.25□□□□□ -1.89
LIM2P55344 CYP4F29P-201ENST00000420685 446 ntBASIC3.25□□□□□ -1.89
LIM2P55344 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.25□□□□□ -1.89
LIM2P55344 OFD1P18Y-201ENST00000420889 959 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.25□□□□□ -1.89
LIM2P55344 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.25□□□□□ -1.89
LIM2P55344 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.25□□□□□ -1.89
LIM2P55344 CKS1BP5-201ENST00000434172 273 ntBASIC3.25□□□□□ -1.89
LIM2P55344 BX679664.1-201ENST00000434429 253 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC004022.1-201ENST00000447766 1066 ntBASIC3.25□□□□□ -1.89
LIM2P55344 TRBV26-201ENST00000456572 344 ntBASIC3.25□□□□□ -1.89
LIM2P55344 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AP000873.1-201ENST00000463987 400 ntBASIC3.25□□□□□ -1.89
LIM2P55344 RPL5P23-201ENST00000496040 868 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.25□□□□□ -1.89
LIM2P55344 RNU6-885P-201ENST00000516607 104 ntBASIC3.25□□□□□ -1.89
LIM2P55344 MIR2276-201ENST00000516886 89 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.25□□□□□ -1.89
LIM2P55344 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.25□□□□□ -1.89
LIM2P55344 AP000790.1-201ENST00000528891 737 ntBASIC3.25□□□□□ -1.89
LIM2P55344 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.25□□□□□ -1.89
LIM2P55344 AC092470.1-201ENST00000546187 132 ntBASIC3.25□□□□□ -1.89
LIM2P55344 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.25□□□□□ -1.89
LIM2P55344 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.25□□□□□ -1.89
LIM2P55344 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.25□□□□□ -1.89
LIM2P55344 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.25□□□□□ -1.89
LIM2P55344 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.25□□□□□ -1.89
LIM2P55344 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LIM2P55344 AC067852.3-201ENST00000589177 561 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AL158050.2-201ENST00000605336 568 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AL583856.2-201ENST00000606298 543 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC092354.2-201ENST00000607786 514 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AL391834.2-201ENST00000609982 546 ntBASIC3.25□□□□□ -1.89
LIM2P55344 AC098679.5-201ENST00000624394 571 ntBASIC3.25□□□□□ -1.89
LIM2P55344 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.25□□□□□ -1.89
LIM2P55344 AL445984.1-201ENST00000637834 659 ntBASIC3.25□□□□□ -1.89
LIM2P55344 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIM2P55344 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.24□□□□□ -1.89
LIM2P55344 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 ZNF734P-201ENST00000419494 1534 ntBASIC3.24□□□□□ -1.89
LIM2P55344 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AL513302.2-201ENST00000562313 1842 ntBASIC3.24□□□□□ -1.89
LIM2P55344 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIM2P55344 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIM2P55344 SUGT1P1-201ENST00000379514 476 ntBASIC3.24□□□□□ -1.89
LIM2P55344 Y_RNA.578-201ENST00000390903 88 ntBASIC3.24□□□□□ -1.89
LIM2P55344 SNORA48.7-201ENST00000391302 135 ntBASIC3.24□□□□□ -1.89
LIM2P55344 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 AL603766.1-201ENST00000407763 664 ntBASIC3.24□□□□□ -1.89
LIM2P55344 RN7SKP111-201ENST00000410349 271 ntBASIC3.24□□□□□ -1.89
LIM2P55344 FCF1P2-201ENST00000415284 583 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AL354692.1-201ENST00000423044 315 ntBASIC3.24□□□□□ -1.89
LIM2P55344 RPS6P14-201ENST00000425165 719 ntBASIC3.24□□□□□ -1.89
LIM2P55344 DPRXP1-201ENST00000426312 460 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 AC114973.1-201ENST00000429057 632 ntBASIC3.24□□□□□ -1.89
LIM2P55344 MTCO1P3-201ENST00000429327 192 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC092393.1-201ENST00000439625 742 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 RPL23AP16-201ENST00000441715 421 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.24□□□□□ -1.89
LIM2P55344 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.24□□□□□ -1.89
LIM2P55344 RPL12P26-201ENST00000452430 487 ntBASIC3.24□□□□□ -1.89
LIM2P55344 NDUFA5P7-201ENST00000452914 242 ntBASIC3.24□□□□□ -1.89
LIM2P55344 MTCO3P2-201ENST00000457365 171 ntBASIC3.24□□□□□ -1.89
LIM2P55344 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.24□□□□□ -1.89
LIM2P55344 RPL21P129-201ENST00000491732 478 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.24□□□□□ -1.89
LIM2P55344 AC011352.3-201ENST00000505162 593 ntBASIC3.24□□□□□ -1.89
LIM2P55344 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIM2P55344 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.24□□□□□ -1.89
LIM2P55344 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
LIM2P55344 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
LIM2P55344 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms