Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH12P55289 GDI2P2-201ENST00000445131 608 ntBASIC3.97□□□□□ -1.77
CDH12P55289 CDC27P1-201ENST00000445384 715 ntBASIC3.97□□□□□ -1.77
CDH12P55289 ARL2BPP10-201ENST00000446487 531 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC073264.2-201ENST00000448886 166 ntBASIC3.97□□□□□ -1.77
CDH12P55289 SSXP1-201ENST00000453640 473 ntBASIC3.97□□□□□ -1.77
CDH12P55289 DHFRP3-201ENST00000455595 559 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC087385.1-201ENST00000475062 312 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC017015.1-201ENST00000477387 286 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC139783.2-201ENST00000504847 1145 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC021678.1-201ENST00000505195 936 ntBASIC3.97□□□□□ -1.77
CDH12P55289 POU5F1P7-201ENST00000508759 541 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH12P55289 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH12P55289 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
CDH12P55289 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH12P55289 AP002748.2-201ENST00000528671 348 ntBASIC3.97□□□□□ -1.77
CDH12P55289 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH12P55289 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH12P55289 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH12P55289 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH12P55289 MTND1P15-201ENST00000579262 949 ntBASIC3.97□□□□□ -1.77
CDH12P55289 MIR544B-201ENST00000582372 78 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC015871.2-201ENST00000603605 948 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AL136363.2-201ENST00000604173 851 ntBASIC3.97□□□□□ -1.77
CDH12P55289 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH12P55289 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AC073968.1-201ENST00000618594 637 ntBASIC3.97□□□□□ -1.77
CDH12P55289 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH12P55289 AC097504.1-201ENST00000515103 2415 ntBASIC3.97□□□□□ -1.77
CDH12P55289 AL592148.3-201ENST00000608771 2646 ntBASIC3.97□□□□□ -1.77
CDH12P55289 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH12P55289 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDH12P55289 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH12P55289 Y_RNA.517-201ENST00000384551 106 ntBASIC3.96□□□□□ -1.78
CDH12P55289 U8.14-201ENST00000390843 143 ntBASIC3.96□□□□□ -1.78
CDH12P55289 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 MIR320C1-201ENST00000408566 88 ntBASIC3.96□□□□□ -1.78
CDH12P55289 RNA5SP39-201ENST00000411245 120 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 RPS12P5-201ENST00000423449 371 ntBASIC3.96□□□□□ -1.78
CDH12P55289 RPEP3-201ENST00000425462 676 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AL445669.1-201ENST00000426743 755 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH12P55289 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 RPL37P21-201ENST00000435890 276 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC092641.1-201ENST00000440229 772 ntBASIC3.96□□□□□ -1.78
CDH12P55289 HMGB3P21-201ENST00000452483 547 ntBASIC3.96□□□□□ -1.78
CDH12P55289 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 AL121877.1-201ENST00000453704 622 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AL513533.1-201ENST00000453728 415 ntBASIC3.96□□□□□ -1.78
CDH12P55289 BX322784.1-201ENST00000455793 1077 ntBASIC3.96□□□□□ -1.78
CDH12P55289 OR9M1P-201ENST00000459641 921 ntBASIC3.96□□□□□ -1.78
CDH12P55289 RN7SL610P-201ENST00000463845 291 ntBASIC3.96□□□□□ -1.78
CDH12P55289 PABPC1P3-201ENST00000469174 459 ntBASIC3.96□□□□□ -1.78
CDH12P55289 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH12P55289 AC006517.1-201ENST00000480485 328 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC011825.1-201ENST00000484967 388 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC104164.2-201ENST00000496953 495 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC116347.2-201ENST00000514912 523 ntBASIC3.96□□□□□ -1.78
CDH12P55289 RNU6-720P-201ENST00000516363 108 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH12P55289 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 AC068587.4-201ENST00000533893 186 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AP006289.1-201ENST00000538089 277 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 MIR5186-201ENST00000577504 120 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH12P55289 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH12P55289 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH12P55289 AC073648.5-201ENST00000603502 305 ntBASIC3.96□□□□□ -1.78
CDH12P55289 BCRP9-201ENST00000605312 388 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC024940.4-201ENST00000605507 246 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AL021997.1-201ENST00000605757 193 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC010857.1-201ENST00000606398 594 ntBASIC3.96□□□□□ -1.78
CDH12P55289 Z99129.1-201ENST00000612510 255 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AL021997.2-201ENST00000615674 271 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC015540.1-201ENST00000615828 501 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC007546.1-201ENST00000619452 559 ntBASIC3.96□□□□□ -1.78
CDH12P55289 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH12P55289 AL359715.5-201ENST00000623431 443 ntBASIC3.96□□□□□ -1.78
CDH12P55289 AC008785.1-201ENST00000624475 456 ntBASIC3.96□□□□□ -1.78
CDH12P55289 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 AC011978.2-201ENST00000569835 2054 ntBASIC3.96□□□□□ -1.78
CDH12P55289 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH12P55289 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CDH12P55289 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CDH12P55289 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDH12P55289 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms