Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPS7P15-201ENST00000415804 584 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.98□□□□□ -1.77
LIMK1P53667 AL513174.1-201ENST00000423182 629 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.98□□□□□ -1.77
LIMK1P53667 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.98□□□□□ -1.77
LIMK1P53667 OR5BE1P-201ENST00000425977 939 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 NANOGP2-201ENST00000435391 727 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 SETP5-201ENST00000437270 562 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AL662791.1-201ENST00000441992 928 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 RNU7-170P-201ENST00000459303 61 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 RPS29P2-201ENST00000479278 136 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.98□□□□□ -1.77
LIMK1P53667 NIPA2P2-201ENST00000496376 1083 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 RPL23AP55-201ENST00000498163 452 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.98□□□□□ -1.77
LIMK1P53667 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC093853.1-201ENST00000515689 483 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC087808.1-201ENST00000520501 361 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC107954.1-201ENST00000565906 727 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC015688.2-201ENST00000584523 262 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.98□□□□□ -1.77
LIMK1P53667 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.98□□□□□ -1.77
LIMK1P53667 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.98□□□□□ -1.77
LIMK1P53667 AL050303.3-201ENST00000613704 284 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AL121895.2-201ENST00000619558 447 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC022509.4-201ENST00000621404 572 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC019278.1-201ENST00000623516 479 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AC026634.1-201ENST00000634369 198 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 OR5BE1P-202ENST00000641168 1176 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
LIMK1P53667 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIMK1P53667 AL035425.3-201ENST00000564206 4996 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 FAM35DP-201ENST00000323387 2712 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 AP004289.2-201ENST00000444413 1457 ntBASIC3.98□□□□□ -1.77
LIMK1P53667 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIMK1P53667 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LIMK1P53667 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 RNU6-251P-201ENST00000363235 104 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 U1.1-201ENST00000384101 164 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 RNVU1-14-201ENST00000384770 164 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 MTHFD2P2-201ENST00000407725 247 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 SNORA3.3-201ENST00000408712 125 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 RNU2-28P-201ENST00000410457 189 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC096664.2-201ENST00000411843 406 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK1P53667 RPS23P10-201ENST00000416185 486 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC092634.6-201ENST00000418558 192 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMK1P53667 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.97□□□□□ -1.77
LIMK1P53667 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 RPL23AP16-201ENST00000441715 421 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 MTCO3P2-201ENST00000457365 171 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.97□□□□□ -1.77
LIMK1P53667 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.97□□□□□ -1.77
LIMK1P53667 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 RN7SKP116-201ENST00000516902 319 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK1P53667 AP004371.1-201ENST00000525240 214 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 OR4A45P-201ENST00000529954 901 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 ZNF705CP-201ENST00000530515 889 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC091516.1-201ENST00000549191 703 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC090502.2-201ENST00000549267 280 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK1P53667 AC027807.1-201ENST00000559921 996 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.97□□□□□ -1.77
LIMK1P53667 AC011468.4-201ENST00000603942 409 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AL035411.2-201ENST00000604022 421 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC025588.3-201ENST00000604182 274 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AL160290.3-201ENST00000604869 165 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC069545.1-201ENST00000605671 358 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 Z98200.1-201ENST00000607298 470 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AL513477.2-201ENST00000607858 568 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AC024257.5-201ENST00000612739 531 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 XIST_intron.1-201ENST00000619444 68 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMK1P53667 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LIMK1P53667 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIMK1P53667 AC138915.3-201ENST00000562908 1389 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
LIMK1P53667 AC091152.2-201ENST00000591628 2569 ntBASIC3.97□□□□□ -1.77
LIMK1P53667 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LIMK1P53667 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.96□□□□□ -1.77
LIMK1P53667 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LIMK1P53667 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms