Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MTND2P2-201ENST00000434633 945 ntBASIC3.11□□□□□ -1.91
NUP98P52948 HMGN1P5-201ENST00000448591 263 ntBASIC3.11□□□□□ -1.91
NUP98P52948 CLIC4P1-201ENST00000453177 535 ntBASIC3.11□□□□□ -1.91
NUP98P52948 RN7SKP24-201ENST00000515888 284 ntBASIC3.11□□□□□ -1.91
NUP98P52948 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.11□□□□□ -1.91
NUP98P52948 MIR4769-201ENST00000584126 77 ntBASIC3.11□□□□□ -1.91
NUP98P52948 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.11□□□□□ -1.91
NUP98P52948 Z73965.1-201ENST00000623412 2297 ntBASIC3.11□□□□□ -1.91
NUP98P52948 AC006020.1-201ENST00000420179 1854 ntBASIC3.11□□□□□ -1.91
NUP98P52948 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUP98P52948 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUP98P52948 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
NUP98P52948 PHKBP1-201ENST00000450951 1951 ntBASIC3.1□□□□□ -1.91
NUP98P52948 EIF5P1-201ENST00000400019 1231 ntBASIC3.1□□□□□ -1.91
NUP98P52948 SMC4P1-201ENST00000414479 527 ntBASIC3.1□□□□□ -1.91
NUP98P52948 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.1□□□□□ -1.91
NUP98P52948 RPS15AP6-201ENST00000420703 385 ntBASIC3.1□□□□□ -1.91
NUP98P52948 AC092013.1-201ENST00000438795 332 ntBASIC3.1□□□□□ -1.91
NUP98P52948 RPL23AP45-201ENST00000476406 468 ntBASIC3.1□□□□□ -1.91
NUP98P52948 OR5H5P-201ENST00000503164 928 ntBASIC3.1□□□□□ -1.91
NUP98P52948 AC008565.1-201ENST00000509046 885 ntBASIC3.1□□□□□ -1.91
NUP98P52948 PDCD5P1-201ENST00000543528 309 ntBASIC3.1□□□□□ -1.91
NUP98P52948 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP98P52948 RPL23AP84-201ENST00000571193 464 ntBASIC3.1□□□□□ -1.91
NUP98P52948 MIR5092-201ENST00000583139 88 ntBASIC3.1□□□□□ -1.91
NUP98P52948 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP98P52948 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP98P52948 AC007938.3-201ENST00000604965 623 ntBASIC3.1□□□□□ -1.91
NUP98P52948 AC015849.6-201ENST00000605454 474 ntBASIC3.1□□□□□ -1.91
NUP98P52948 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.1□□□□□ -1.91
NUP98P52948 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUP98P52948 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
NUP98P52948 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
NUP98P52948 AC007342.7-201ENST00000624610 2337 ntBASIC3.1□□□□□ -1.91
NUP98P52948 DPH3P2-201ENST00000422618 250 ntBASIC3.09□□□□□ -1.91
NUP98P52948 BX276092.4-201ENST00000452056 248 ntBASIC3.09□□□□□ -1.91
NUP98P52948 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.09□□□□□ -1.91
NUP98P52948 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP98P52948 AC103975.1-201ENST00000482506 483 ntBASIC3.09□□□□□ -1.91
NUP98P52948 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP98P52948 HAUS1P1-201ENST00000505275 832 ntBASIC3.09□□□□□ -1.91
NUP98P52948 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NUP98P52948 MIR4648-201ENST00000580107 72 ntBASIC3.09□□□□□ -1.91
NUP98P52948 AC123786.2-201ENST00000603459 275 ntBASIC3.09□□□□□ -1.91
NUP98P52948 AL392112.1-201ENST00000605115 829 ntBASIC3.09□□□□□ -1.91
NUP98P52948 AC000123.2-201ENST00000623124 461 ntBASIC3.09□□□□□ -1.91
NUP98P52948 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NUP98P52948 AL021368.2-201ENST00000606125 5352 ntBASIC3.09□□□□□ -1.91
NUP98P52948 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NUP98P52948 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NUP98P52948 RN7SKP44-201ENST00000363602 316 ntBASIC3.09□□□□□ -1.92
NUP98P52948 AL590004.2-201ENST00000404787 371 ntBASIC3.09□□□□□ -1.92
NUP98P52948 RPS20P25-201ENST00000412447 352 ntBASIC3.09□□□□□ -1.92
NUP98P52948 AC003685.2-201ENST00000422795 395 ntBASIC3.09□□□□□ -1.92
NUP98P52948 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.09□□□□□ -1.92
NUP98P52948 AC005189.1-201ENST00000431286 310 ntBASIC3.09□□□□□ -1.92
NUP98P52948 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.09□□□□□ -1.92
NUP98P52948 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.09□□□□□ -1.92
NUP98P52948 AC034244.2-201ENST00000514668 858 ntBASIC3.09□□□□□ -1.92
NUP98P52948 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.09□□□□□ -1.92
NUP98P52948 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.09□□□□□ -1.92
NUP98P52948 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.92
NUP98P52948 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
NUP98P52948 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NUP98P52948 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NUP98P52948 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.08□□□□□ -1.92
NUP98P52948 AC093311.1-201ENST00000506586 2021 ntBASIC3.08□□□□□ -1.92
NUP98P52948 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP98P52948 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 AL592437.2-201ENST00000421655 2434 ntBASIC3.08□□□□□ -1.92
NUP98P52948 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP98P52948 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NUP98P52948 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP98P52948 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.08□□□□□ -1.92
NUP98P52948 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP98P52948 RPS6P12-201ENST00000432491 726 ntBASIC3.08□□□□□ -1.92
NUP98P52948 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP98P52948 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP98P52948 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP98P52948 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 CKS1BP7-201ENST00000522230 235 ntBASIC3.08□□□□□ -1.92
NUP98P52948 AC090819.1-201ENST00000523800 1111 ntBASIC3.08□□□□□ -1.92
NUP98P52948 AC025423.2-201ENST00000537570 439 ntBASIC3.08□□□□□ -1.92
NUP98P52948 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP98P52948 AC010928.3-201ENST00000587712 541 ntBASIC3.08□□□□□ -1.92
NUP98P52948 AC090953.1-201ENST00000604305 1092 ntBASIC3.08□□□□□ -1.92
NUP98P52948 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.08□□□□□ -1.92
NUP98P52948 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
NUP98P52948 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NUP98P52948 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP98P52948 RNU6-603P-201ENST00000411403 107 ntBASIC3.07□□□□□ -1.92
NUP98P52948 RNU2-6P-201ENST00000411404 190 ntBASIC3.07□□□□□ -1.92
NUP98P52948 AL135786.1-201ENST00000415892 214 ntBASIC3.07□□□□□ -1.92
NUP98P52948 snoU13.26-201ENST00000459452 105 ntBASIC3.07□□□□□ -1.92
NUP98P52948 RPL9P33-201ENST00000484311 566 ntBASIC3.07□□□□□ -1.92
NUP98P52948 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms