Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC107982.1-201ENST00000507171 1300 ntBASIC3.88□□□□□ -1.79
LHX1P48742 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX1P48742 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 LINC00561-201ENST00000565815 2738 ntBASIC3.87□□□□□ -1.79
LHX1P48742 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LHX1P48742 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 Y_RNA.25-201ENST00000362528 102 ntBASIC3.87□□□□□ -1.79
LHX1P48742 U3.15-201ENST00000365398 212 ntBASIC3.87□□□□□ -1.79
LHX1P48742 Y_RNA.465-201ENST00000384293 102 ntBASIC3.87□□□□□ -1.79
LHX1P48742 HSPE1P8-201ENST00000406997 288 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AL590084.1-201ENST00000407885 387 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX1P48742 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX1P48742 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 MTCO2P25-201ENST00000447065 681 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX1P48742 PPIAP3-201ENST00000450588 505 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AC073387.1-201ENST00000453261 709 ntBASIC3.87□□□□□ -1.79
LHX1P48742 TRBV26-201ENST00000456572 344 ntBASIC3.87□□□□□ -1.79
LHX1P48742 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX1P48742 MTCYBP37-201ENST00000510642 1133 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 IGKV2D-19-201ENST00000523346 262 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX1P48742 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX1P48742 AP000619.3-201ENST00000535634 1127 ntBASIC3.87□□□□□ -1.79
LHX1P48742 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX1P48742 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.87□□□□□ -1.79
LHX1P48742 MTND4P33-201ENST00000556706 766 ntBASIC3.87□□□□□ -1.79
LHX1P48742 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX1P48742 AL132657.2-201ENST00000564417 358 ntBASIC3.87□□□□□ -1.79
LHX1P48742 OR4G1P-201ENST00000588632 938 ntBASIC3.87□□□□□ -1.79
LHX1P48742 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.87□□□□□ -1.79
LHX1P48742 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX1P48742 AC107075.1-201ENST00000613695 314 ntBASIC3.87□□□□□ -1.79
LHX1P48742 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX1P48742 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.86□□□□□ -1.79
LHX1P48742 AL136964.1-201ENST00000622038 2990 ntBASIC3.86□□□□□ -1.79
LHX1P48742 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 SNORD9-201ENST00000362566 104 ntBASIC3.86□□□□□ -1.79
LHX1P48742 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.86□□□□□ -1.79
LHX1P48742 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LHX1P48742 RNU6-657P-201ENST00000383904 107 ntBASIC3.86□□□□□ -1.79
LHX1P48742 MIR513B-201ENST00000385136 84 ntBASIC3.86□□□□□ -1.79
LHX1P48742 RNA5SP80-201ENST00000410475 111 ntBASIC3.86□□□□□ -1.79
LHX1P48742 RPS29P4-201ENST00000414733 161 ntBASIC3.86□□□□□ -1.79
LHX1P48742 AC069157.1-201ENST00000421749 137 ntBASIC3.86□□□□□ -1.79
LHX1P48742 CYCSP4-201ENST00000429682 331 ntBASIC3.86□□□□□ -1.79
LHX1P48742 CKS1BP5-201ENST00000434172 273 ntBASIC3.86□□□□□ -1.79
LHX1P48742 RPL23AP33-201ENST00000442301 452 ntBASIC3.86□□□□□ -1.79
LHX1P48742 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LHX1P48742 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.86□□□□□ -1.79
LHX1P48742 AC104073.1-201ENST00000451988 151 ntBASIC3.86□□□□□ -1.79
LHX1P48742 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.86□□□□□ -1.79
LHX1P48742 AC146507.1-201ENST00000468335 354 ntBASIC3.86□□□□□ -1.79
LHX1P48742 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 BTF3L4P4-201ENST00000506381 449 ntBASIC3.86□□□□□ -1.79
LHX1P48742 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.86□□□□□ -1.79
LHX1P48742 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX1P48742 PTGES3P3-201ENST00000511479 482 ntBASIC3.86□□□□□ -1.79
LHX1P48742 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX1P48742 AC005798.1-201ENST00000513715 387 ntBASIC3.86□□□□□ -1.79
LHX1P48742 RN7SKP265-201ENST00000516448 223 ntBASIC3.86□□□□□ -1.79
LHX1P48742 RNA5SP143-201ENST00000516936 115 ntBASIC3.86□□□□□ -1.79
LHX1P48742 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX1P48742 MIR7851-201ENST00000610611 160 ntBASIC3.86□□□□□ -1.79
LHX1P48742 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX1P48742 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX1P48742 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX1P48742 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 AC090337.1-201ENST00000579651 2074 ntBASIC3.86□□□□□ -1.79
LHX1P48742 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX1P48742 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.85□□□□□ -1.79
LHX1P48742 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LHX1P48742 PABPC1P7-201ENST00000413177 1513 ntBASIC3.85□□□□□ -1.79
LHX1P48742 AC007823.1-201ENST00000569932 1566 ntBASIC3.85□□□□□ -1.79
LHX1P48742 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LHX1P48742 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LHX1P48742 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms