Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 MED28P5-201ENST00000528254 438 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC100770.1-201ENST00000532310 322 ntBASIC4.02□□□□□ -1.77
SOX2P48431 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.02□□□□□ -1.77
SOX2P48431 AC024224.1-201ENST00000538284 609 ntBASIC4.02□□□□□ -1.77
SOX2P48431 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 TPRKBP2-201ENST00000565969 475 ntBASIC4.02□□□□□ -1.77
SOX2P48431 MIR1269B-201ENST00000580405 75 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.02□□□□□ -1.77
SOX2P48431 RPL7P50-201ENST00000600588 727 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC008782.1-201ENST00000603386 430 ntBASIC4.02□□□□□ -1.77
SOX2P48431 YWHAQP7-201ENST00000603536 658 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC119501.1-201ENST00000603646 475 ntBASIC4.02□□□□□ -1.77
SOX2P48431 AC091905.2-201ENST00000623143 306 ntBASIC4.02□□□□□ -1.77
SOX2P48431 PISRT1-201ENST00000626175 531 ntBASIC4.02□□□□□ -1.77
SOX2P48431 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SOX2P48431 AC095050.2-201ENST00000510748 1458 ntBASIC4.02□□□□□ -1.77
SOX2P48431 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX2P48431 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX2P48431 AL133243.3-201ENST00000617415 3004 ntBASIC4.02□□□□□ -1.77
SOX2P48431 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.02□□□□□ -1.77
SOX2P48431 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.02□□□□□ -1.77
SOX2P48431 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX2P48431 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOX2P48431 NUP58P1-201ENST00000502546 1738 ntBASIC4.01□□□□□ -1.77
SOX2P48431 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.01□□□□□ -1.77
SOX2P48431 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX2P48431 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOX2P48431 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SOX2P48431 Y_RNA.296-201ENST00000364930 108 ntBASIC4.01□□□□□ -1.77
SOX2P48431 RNA5SP151-201ENST00000365632 117 ntBASIC4.01□□□□□ -1.77
SOX2P48431 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 RNU6-730P-201ENST00000383954 104 ntBASIC4.01□□□□□ -1.77
SOX2P48431 RPS3AP36-201ENST00000398190 775 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.01□□□□□ -1.77
SOX2P48431 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX2P48431 AC004987.3-201ENST00000413879 771 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 AC069213.2-201ENST00000420238 366 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.01□□□□□ -1.77
SOX2P48431 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 AC104837.2-201ENST00000427236 424 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC127537.2-201ENST00000439258 465 ntBASIC4.01□□□□□ -1.77
SOX2P48431 RPL17P49-201ENST00000443728 411 ntBASIC4.01□□□□□ -1.77
SOX2P48431 H2AFZP5-201ENST00000446960 382 ntBASIC4.01□□□□□ -1.77
SOX2P48431 HMGB3P21-201ENST00000452483 547 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.01□□□□□ -1.77
SOX2P48431 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 AP001992.1-205ENST00000462248 379 ntBASIC4.01□□□□□ -1.77
SOX2P48431 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.01□□□□□ -1.77
SOX2P48431 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 AC006390.1-201ENST00000508068 283 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC093853.1-201ENST00000515689 483 ntBASIC4.01□□□□□ -1.77
SOX2P48431 RNU6-314P-201ENST00000516574 104 ntBASIC4.01□□□□□ -1.77
SOX2P48431 SCARNA21.2-201ENST00000516600 166 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 MTCYBP41-201ENST00000528913 1123 ntBASIC4.01□□□□□ -1.77
SOX2P48431 CCNG2P1-201ENST00000549521 1000 ntBASIC4.01□□□□□ -1.77
SOX2P48431 UBE2FP2-201ENST00000566646 462 ntBASIC4.01□□□□□ -1.77
SOX2P48431 HNRNPCP4-201ENST00000571636 900 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC090615.1-201ENST00000577519 154 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.01□□□□□ -1.77
SOX2P48431 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX2P48431 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 AL009028.1-201ENST00000604895 802 ntBASIC4.01□□□□□ -1.77
SOX2P48431 AL109618.2-201ENST00000605527 211 ntBASIC4.01□□□□□ -1.77
SOX2P48431 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.01□□□□□ -1.77
SOX2P48431 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOX2P48431 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SOX2P48431 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SOX2P48431 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX2P48431 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SOX2P48431 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SOX2P48431 ZFRP1-201ENST00000457579 2970 ntBASIC4□□□□□ -1.77
SOX2P48431 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4□□□□□ -1.77
SOX2P48431 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4□□□□□ -1.77
SOX2P48431 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
SOX2P48431 Y_RNA.46-201ENST00000362695 102 ntBASIC4□□□□□ -1.77
SOX2P48431 RNA5SP435-201ENST00000364044 108 ntBASIC4□□□□□ -1.77
SOX2P48431 SNORA74A-201ENST00000364089 198 ntBASIC4□□□□□ -1.77
SOX2P48431 MIR181A1-201ENST00000385026 110 ntBASIC4□□□□□ -1.77
SOX2P48431 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4□□□□□ -1.77
SOX2P48431 RPL7P25-201ENST00000404151 721 ntBASIC4□□□□□ -1.77
SOX2P48431 RN7SKP206-201ENST00000410823 293 ntBASIC4□□□□□ -1.77
SOX2P48431 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4□□□□□ -1.77
SOX2P48431 MTND1P21-201ENST00000412991 285 ntBASIC4□□□□□ -1.77
SOX2P48431 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 AC093162.1-201ENST00000419682 124 ntBASIC4□□□□□ -1.77
SOX2P48431 AC079355.1-201ENST00000421770 223 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms