Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL031985.3-201ENST00000565390 2449 ntBASIC4.24□□□□□ -1.73
PTPN9P43378 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN9P43378 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN9P43378 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PTPN9P43378 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN9P43378 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN9P43378 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PTPN9P43378 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTPN9P43378 SNORD35B-201ENST00000363660 87 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 OR8G2P-201ENST00000412796 908 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 RPS15AP40-201ENST00000419621 391 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AL049610.1-201ENST00000423374 372 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 KCTD10P1-201ENST00000434203 625 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN9P43378 ARPC3P5-201ENST00000448802 534 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC104073.1-201ENST00000451988 151 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AC073387.1-201ENST00000453261 709 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC026410.2-201ENST00000460281 156 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AC092754.2-201ENST00000463506 460 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AC092045.1-201ENST00000495716 1231 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC016065.2-201ENST00000514530 444 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN9P43378 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN9P43378 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN9P43378 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN9P43378 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN9P43378 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN9P43378 AC073530.2-201ENST00000623987 261 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AC079228.1-201ENST00000624774 1049 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AL773545.4-201ENST00000637262 310 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 AL513478.4-201ENST00000641636 310 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN9P43378 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN9P43378 MTCO1P14-201ENST00000441695 1559 ntBASIC4.23□□□□□ -1.73
PTPN9P43378 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 Z82217.1-201ENST00000625157 8149 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 RPL21P132-201ENST00000331267 462 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 RPL32P3-201ENST00000359025 275 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 Y_RNA.302-201ENST00000364997 102 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 AC068538.1-201ENST00000376856 336 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 SNRPEP2-201ENST00000397592 279 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 BMS1P19-201ENST00000433925 393 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC009961.3-201ENST00000449832 765 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AL451050.1-201ENST00000450126 415 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN9P43378 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN9P43378 FABP3P2-201ENST00000453169 399 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 RPL7P19-201ENST00000469948 618 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN9P43378 SETP11-201ENST00000473027 690 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AC072039.1-201ENST00000477611 581 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.22□□□□□ -1.73
PTPN9P43378 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC026412.2-201ENST00000512270 1075 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC008802.1-201ENST00000519121 791 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.22□□□□□ -1.73
PTPN9P43378 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN9P43378 AC115621.1-201ENST00000604653 858 ntBASIC4.22□□□□□ -1.73
PTPN9P43378 AC080013.4-201ENST00000607624 649 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms