Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC244258.1-201ENST00000637553 1071 ntBASIC3.6□□□□□ -1.83
TRIM23P36406 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM23P36406 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM23P36406 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
TRIM23P36406 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM23P36406 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
TRIM23P36406 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC093010.3-201ENST00000570269 15214 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM23P36406 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TRIM23P36406 MIR7-3-201ENST00000384898 110 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 HMGN2P8-201ENST00000391458 268 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 MCTS2P-201ENST00000394552 546 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM23P36406 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 RNA5SP44-201ENST00000410446 133 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM23P36406 RPS29P4-201ENST00000414733 161 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 AL451062.2-201ENST00000427515 271 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 IFNNP1-201ENST00000429219 553 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM23P36406 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM23P36406 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 AL358794.1-201ENST00000445689 381 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 RPL21P23-201ENST00000446654 460 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC010655.1-201ENST00000449336 292 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM23P36406 DUXAP2-201ENST00000519198 589 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM23P36406 LRRC6P1-201ENST00000532188 885 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 OR5B10P-201ENST00000532869 642 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC092747.2-201ENST00000545069 983 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 UBE2NP1-201ENST00000545592 458 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC010198.2-201ENST00000550612 259 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC090616.5-202ENST00000582111 297 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 MIR3922-201ENST00000585192 84 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM23P36406 BRDTP1-201ENST00000605735 677 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 HMGN2P28-201ENST00000606102 262 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM23P36406 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC069209.1-201ENST00000619282 651 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 AC090772.4-201ENST00000623599 362 ntBASIC3.59□□□□□ -1.83
TRIM23P36406 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM23P36406 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.59□□□□□ -1.84
TRIM23P36406 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.84
TRIM23P36406 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM23P36406 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.59□□□□□ -1.84
TRIM23P36406 AL049781.1-201ENST00000623195 3585 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM23P36406 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TRIM23P36406 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 RNU1-18P-201ENST00000363062 164 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM23P36406 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM23P36406 RNU6-1226P-201ENST00000384317 107 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 RNU6-441P-201ENST00000384545 106 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 RNU6-925P-201ENST00000384629 104 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM23P36406 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 HMGB3P20-201ENST00000417997 600 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 RPP40P1-201ENST00000426762 456 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM23P36406 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM23P36406 NDUFB1P1-201ENST00000435191 180 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AC092641.1-201ENST00000440229 772 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 RBMY2UP-201ENST00000453474 324 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 PTGES3P5-201ENST00000455109 434 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 DNAJC19P1-201ENST00000455312 319 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 snoU109.3-201ENST00000459477 145 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 CAB39P1-201ENST00000502277 460 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AC048346.1-201ENST00000510247 144 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM23P36406 AC023632.1-201ENST00000518463 375 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM23P36406 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM23P36406 ARL2BPP5-201ENST00000523141 481 ntBASIC3.58□□□□□ -1.84
TRIM23P36406 MTCO3P15-201ENST00000526563 574 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms