Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 USP9YP34-201ENST00000453983 808 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SLC6A4P31645 SNORA18.6-201ENST00000516792 115 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 AC022861.1-201ENST00000522981 663 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AC084757.1-201ENST00000559987 490 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 MIR4277-201ENST00000578298 84 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AC110743.1-201ENST00000584870 478 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AC009977.1-201ENST00000586015 570 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 IMMP1LP1-201ENST00000605170 488 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AC020634.1-201ENST00000608701 549 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 AL355073.2-201ENST00000612106 557 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AC090970.3-201ENST00000612566 866 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 MIR8069-1-201ENST00000616627 86 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AC104010.1-201ENST00000616889 150 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AP005019.3-201ENST00000620418 560 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 MIR6758-201ENST00000620653 63 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 MIR8069-2-201ENST00000621412 86 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 AL445264.1-201ENST00000621719 171 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
SLC6A4P31645 FARSBP1-201ENST00000435808 1778 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC6A4P31645 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC6A4P31645 AC007529.1-201ENST00000418574 2178 ntBASIC4.67□□□□□ -1.66
SLC6A4P31645 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC6A4P31645 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC6A4P31645 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC6A4P31645 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SLC6A4P31645 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC6A4P31645 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SLC6A4P31645 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SLC6A4P31645 RNU1-130P-201ENST00000363930 160 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 RNU6-1283P-201ENST00000365314 105 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 RNU6-1293P-201ENST00000384077 107 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 SDHCP2-201ENST00000398565 501 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 DHFRP6-201ENST00000401776 268 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 BTF3P7-201ENST00000407097 488 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 MIR548F1-201ENST00000408667 84 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC6A4P31645 TMSB10P2-201ENST00000416049 131 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 RAD23BP1-201ENST00000421404 1227 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC6A4P31645 Z74021.1-201ENST00000423610 407 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 NPM1P34-201ENST00000428821 893 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 RSU1P2-202ENST00000437884 485 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AL450263.2-201ENST00000439400 589 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 PSPHP1-201ENST00000450062 261 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 Z82190.1-201ENST00000454534 490 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 MTCO3P38-201ENST00000468910 766 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AC108941.1-201ENST00000502853 530 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC6A4P31645 AC034159.1-201ENST00000513885 583 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC6A4P31645 RNU6-430P-201ENST00000517078 107 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 RNU6-1003P-201ENST00000517099 105 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AP003467.2-201ENST00000520175 319 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AP000827.1-201ENST00000527814 258 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AC009643.1-201ENST00000532030 391 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC6A4P31645 SNORA59B-202ENST00000578183 701 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC090312.1-201ENST00000580637 348 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 NRBF2P1-201ENST00000587407 859 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC6A4P31645 AL020997.2-201ENST00000602607 184 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 BBIP1P1-201ENST00000602999 279 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC103792.1-201ENST00000603591 919 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AC010857.1-201ENST00000606398 594 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AP001596.2-201ENST00000608410 312 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 AL592295.2-201ENST00000612578 206 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 RNU6-156P-201ENST00000621869 107 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 CYP3A51P-201ENST00000633513 256 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
SLC6A4P31645 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC6A4P31645 AL672167.1-203ENST00000641299 2975 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.66□□□□□ -1.66
SLC6A4P31645 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC6A4P31645 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC6A4P31645 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
SLC6A4P31645 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.66
SLC6A4P31645 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.65□□□□□ -1.66
SLC6A4P31645 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
SLC6A4P31645 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms