Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 AC008280.2-201ENST00000455473 307 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 RN7SL132P-201ENST00000478131 296 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 DSTNP2-201ENST00000504533 515 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC104057.1-201ENST00000515547 497 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 TRMT10BP1-201ENST00000519377 943 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 C1GALT1P3-201ENST00000522049 819 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.4□□□□□ -1.87
CASQ1P31415 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC018618.2-201ENST00000604770 446 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.4□□□□□ -1.87
CASQ1P31415 AC011374.2-201ENST00000607135 526 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC013468.1-201ENST00000608680 598 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC018926.3-201ENST00000618841 406 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC002064.3-201ENST00000623448 346 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 MIR6830-201ENST00000636015 70 ntBASIC3.4□□□□□ -1.87
CASQ1P31415 AC138915.1-201ENST00000565427 1685 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CASQ1P31415 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CASQ1P31415 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CASQ1P31415 RNU6-339P-201ENST00000384310 107 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CASQ1P31415 AC025750.1-201ENST00000399891 379 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.39□□□□□ -1.87
CASQ1P31415 RPS3AP9-201ENST00000417027 792 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 RPS6P14-201ENST00000425165 719 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 CYCSP4-201ENST00000429682 331 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 ATP5JP1-201ENST00000431631 322 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 PTP4A1P3-201ENST00000433661 420 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AL590664.1-201ENST00000448065 339 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 MORF4L1P4-201ENST00000450245 976 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.39□□□□□ -1.87
CASQ1P31415 AP004217.1-201ENST00000480579 346 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 RN7SKP18-201ENST00000516005 275 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 SNORA31.8-201ENST00000516327 108 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 RAB9BP1-201ENST00000519581 626 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.39□□□□□ -1.87
CASQ1P31415 NBEAP1-201ENST00000554452 979 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AC017100.2-201ENST00000584628 355 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AL162713.1-201ENST00000604480 262 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AC019159.1-201ENST00000605094 187 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 RPL23AP88-201ENST00000605759 454 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AC107871.2-201ENST00000612894 502 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AL157817.1-201ENST00000614264 790 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AL162574.2-201ENST00000614618 657 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
CASQ1P31415 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.39□□□□□ -1.87
CASQ1P31415 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CASQ1P31415 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CASQ1P31415 AC011460.1-201ENST00000636268 1834 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 RPS4XP3-201ENST00000398541 413 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 MTND4P13-201ENST00000402078 1023 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 HMGN2P30-201ENST00000423237 256 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC091862.1-201ENST00000438016 1100 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 RPS29P7-201ENST00000439662 171 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.38□□□□□ -1.87
CASQ1P31415 GSTA11P-201ENST00000452866 669 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC073387.1-201ENST00000453261 709 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.38□□□□□ -1.87
CASQ1P31415 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.38□□□□□ -1.87
CASQ1P31415 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC087373.1-201ENST00000524920 491 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AP001804.3-201ENST00000525146 880 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC103843.2-201ENST00000530523 682 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC090695.1-201ENST00000561269 1222 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 MTCO3P13-201ENST00000577757 781 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC020895.1-201ENST00000595362 272 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.38□□□□□ -1.87
CASQ1P31415 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
CASQ1P31415 AL359198.2-201ENST00000611836 194 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.38□□□□□ -1.87
CASQ1P31415 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.38□□□□□ -1.87
CASQ1P31415 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CASQ1P31415 AC099654.7-201ENST00000635788 2127 ntBASIC3.38□□□□□ -1.87
CASQ1P31415 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CASQ1P31415 FAM35BP-202ENST00000497389 3337 ntBASIC3.37□□□□□ -1.87
CASQ1P31415 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.37□□□□□ -1.87
CASQ1P31415 RNU6-761P-201ENST00000384148 107 ntBASIC3.37□□□□□ -1.87
CASQ1P31415 RNU6-1226P-201ENST00000384317 107 ntBASIC3.37□□□□□ -1.87
CASQ1P31415 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CASQ1P31415 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
CASQ1P31415 FO393413.1-201ENST00000402892 195 ntBASIC3.37□□□□□ -1.87
CASQ1P31415 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.37□□□□□ -1.87
CASQ1P31415 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.37□□□□□ -1.87
CASQ1P31415 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CASQ1P31415 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.37□□□□□ -1.87
CASQ1P31415 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.37□□□□□ -1.87
CASQ1P31415 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.37□□□□□ -1.87
CASQ1P31415 HMGB1P46-201ENST00000520062 610 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms