Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3□□□□□ -1.93
COL4A5P29400 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL4A5P29400 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL4A5P29400 MIR148B-201ENST00000362252 99 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 Y_RNA.164-201ENST00000363709 102 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 RAC1P3-201ENST00000416129 580 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 USP9YP20-201ENST00000419224 558 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 RPS12P2-201ENST00000439728 269 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 AC096638.1-201ENST00000444678 216 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 AL590399.6-201ENST00000446396 307 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 AC125238.1-201ENST00000448842 249 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A5P29400 RNA5SP445-201ENST00000515889 115 ntBASIC2.99□□□□□ -1.93
COL4A5P29400 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A5P29400 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A5P29400 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A5P29400 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A5P29400 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.99□□□□□ -1.93
COL4A5P29400 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL4A5P29400 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
COL4A5P29400 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A5P29400 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL4A5P29400 SNORA68.2-201ENST00000391263 128 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 RNU6-233P-201ENST00000410845 141 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 DPH3P2-201ENST00000422618 250 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AL589765.3-201ENST00000446084 462 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 MRPL50P4-201ENST00000446432 475 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
COL4A5P29400 RPS27AP9-201ENST00000477681 438 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A5P29400 AL355836.1-201ENST00000555951 870 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.98□□□□□ -1.93
COL4A5P29400 AC068313.1-201ENST00000604028 1008 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AC016727.1-205ENST00000605437 569 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A5P29400 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.98□□□□□ -1.93
COL4A5P29400 AC080128.1-201ENST00000474389 1917 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL4A5P29400 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.98□□□□□ -1.93
COL4A5P29400 RPL21P132-201ENST00000331267 462 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
COL4A5P29400 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL4A5P29400 AL583834.1-201ENST00000406943 343 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AC007064.1-201ENST00000412238 351 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 VTA1P1-201ENST00000414044 866 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A5P29400 RLIMP2-201ENST00000427891 1563 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 UBE2V2P4-201ENST00000447495 259 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A5P29400 RPL9P6-201ENST00000492764 598 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.98□□□□□ -1.93
COL4A5P29400 VWA8P1-201ENST00000510889 176 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AC068657.1-201ENST00000520807 306 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.98□□□□□ -1.93
COL4A5P29400 NPM1P35-201ENST00000533043 868 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.98□□□□□ -1.93
COL4A5P29400 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.98□□□□□ -1.93
COL4A5P29400 SYT14P1-202ENST00000600441 1448 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 PISRT1-201ENST00000626175 531 ntBASIC2.98□□□□□ -1.93
COL4A5P29400 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.98□□□□□ -1.93
COL4A5P29400 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
COL4A5P29400 DCAF13P3-201ENST00000561147 1334 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL4A5P29400 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL4A5P29400 Y_RNA.466-201ENST00000384294 113 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 AL138878.1-201ENST00000405131 347 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 AL592437.1-201ENST00000443781 492 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.97□□□□□ -1.93
COL4A5P29400 HMGB3P8-201ENST00000449709 577 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 HMGN2P23-201ENST00000456759 269 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 SEPT7P6-201ENST00000469999 1143 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 AC098583.1-201ENST00000480875 255 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 RPL36AP21-201ENST00000490372 323 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.97□□□□□ -1.93
COL4A5P29400 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.97□□□□□ -1.93
COL4A5P29400 CKS1BP7-201ENST00000522230 235 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.97□□□□□ -1.93
COL4A5P29400 NF1P10-201ENST00000613227 742 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 AC004696.1-201ENST00000614345 607 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 AC008264.2-201ENST00000610193 3731 ntBASIC2.97□□□□□ -1.93
COL4A5P29400 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL4A5P29400 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
COL4A5P29400 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A5P29400 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A5P29400 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL4A5P29400 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 SNORA70E-201ENST00000384492 135 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 MTND4LP21-201ENST00000415303 295 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 SETP10-201ENST00000424368 814 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A5P29400 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.96□□□□□ -1.94
COL4A5P29400 RPL21P99-201ENST00000480369 423 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 AC119751.1-201ENST00000513357 765 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 RNU6-943P-201ENST00000516960 98 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.96□□□□□ -1.94
COL4A5P29400 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.96□□□□□ -1.94
COL4A5P29400 AC015849.6-201ENST00000605454 474 ntBASIC2.96□□□□□ -1.94
COL4A5P29400 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms