Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 USP8P1-201ENST00000494673 3183 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 RNA5SP509-201ENST00000364577 119 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 RNU6-744P-201ENST00000365557 107 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 RNU6-1316P-201ENST00000384242 108 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 RPS3AP26-201ENST00000398259 784 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 SNORA11F-201ENST00000408237 128 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 Y_RNA.625-201ENST00000411256 107 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC016397.1-201ENST00000412463 242 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.03□□□□□ -1.76
ABCD3P28288 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.03□□□□□ -1.76
ABCD3P28288 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.03□□□□□ -1.76
ABCD3P28288 COX6CP17-201ENST00000421389 185 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.03□□□□□ -1.76
ABCD3P28288 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.03□□□□□ -1.76
ABCD3P28288 RPEP2-201ENST00000432149 701 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.03□□□□□ -1.76
ABCD3P28288 CBX1P1-201ENST00000440184 427 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.03□□□□□ -1.76
ABCD3P28288 OR6C5P-201ENST00000452388 923 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC010285.1-201ENST00000470580 392 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC012158.1-204ENST00000483430 465 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AP001025.2-201ENST00000490908 477 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC093278.1-201ENST00000494700 600 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC005178.1-201ENST00000508392 440 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC118465.1-201ENST00000513820 1271 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC119751.5-201ENST00000514077 770 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.03□□□□□ -1.76
ABCD3P28288 RNA5SP154-201ENST00000516193 111 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.03□□□□□ -1.76
ABCD3P28288 AC007834.2-201ENST00000536310 343 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 OSBPL9P5-201ENST00000542581 171 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.03□□□□□ -1.76
ABCD3P28288 AC090888.1-201ENST00000561335 1141 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 RPL23AP97-201ENST00000568955 471 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.03□□□□□ -1.76
ABCD3P28288 AP001004.1-201ENST00000582468 324 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 SLC25A36P1-201ENST00000590111 465 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 AL590282.1-201ENST00000610379 1136 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 RMST_9.1-201ENST00000619945 193 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 AP000676.3-201ENST00000623299 569 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC140479.6-201ENST00000633535 357 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 AC127502.3-201ENST00000636170 1206 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.03□□□□□ -1.76
ABCD3P28288 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ABCD3P28288 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ABCD3P28288 AC010300.1-201ENST00000600671 5134 ntBASIC4.03□□□□□ -1.77
ABCD3P28288 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.77
ABCD3P28288 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
ABCD3P28288 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 AL672167.1-206ENST00000356293 943 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 RNU6-553P-201ENST00000364047 96 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 RNA5SP22-201ENST00000365393 109 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 AC097374.1-203ENST00000400783 485 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AL356421.1-201ENST00000403255 413 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.02□□□□□ -1.77
ABCD3P28288 RN7SKP167-201ENST00000411047 285 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 MTCO1P17-201ENST00000411522 491 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 HMGB1P11-201ENST00000413899 637 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC004552.1-201ENST00000419089 348 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.02□□□□□ -1.77
ABCD3P28288 AL132765.1-201ENST00000434165 553 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 RPS3AP54-201ENST00000435535 734 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AL117351.1-201ENST00000438864 766 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AL831737.1-201ENST00000441288 271 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 SETD6P1-201ENST00000444575 317 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC009220.1-201ENST00000451614 275 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.02□□□□□ -1.77
ABCD3P28288 snoU13.24-201ENST00000458998 104 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 RPL35AP15-201ENST00000468042 339 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.02□□□□□ -1.77
ABCD3P28288 RPS26P3-201ENST00000470205 348 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC090543.2-201ENST00000483963 348 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC004057.1-201ENST00000485827 348 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC034222.1-201ENST00000494052 532 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms