Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 OR5B19P-201ENST00000531766 928 ntBASIC5.9□□□□□ -1.46
LIG1P18858 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.9□□□□□ -1.46
LIG1P18858 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.9□□□□□ -1.46
LIG1P18858 BX664608.1-201ENST00000610519 487 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.9□□□□□ -1.46
LIG1P18858 AC010149.2-201ENST00000637608 315 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AC074101.1-201ENST00000637861 241 ntBASIC5.9□□□□□ -1.46
LIG1P18858 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIG1P18858 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.9□□□□□ -1.47
LIG1P18858 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.9□□□□□ -1.47
LIG1P18858 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIG1P18858 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIG1P18858 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIG1P18858 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.9□□□□□ -1.47
LIG1P18858 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LIG1P18858 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.9□□□□□ -1.47
LIG1P18858 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.89□□□□□ -1.47
LIG1P18858 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIG1P18858 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.89□□□□□ -1.47
LIG1P18858 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LIG1P18858 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
LIG1P18858 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIG1P18858 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LIG1P18858 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LIG1P18858 RPL23AP57-201ENST00000332361 466 ntBASIC5.89□□□□□ -1.47
LIG1P18858 RNU1-43P-201ENST00000365052 165 ntBASIC5.89□□□□□ -1.47
LIG1P18858 RNU6-456P-201ENST00000384493 107 ntBASIC5.89□□□□□ -1.47
LIG1P18858 MIR223-201ENST00000385204 110 ntBASIC5.89□□□□□ -1.47
LIG1P18858 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LIG1P18858 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.89□□□□□ -1.47
LIG1P18858 SLC35E1P1-201ENST00000419313 864 ntBASIC5.89□□□□□ -1.47
LIG1P18858 ELOCP4-201ENST00000420090 333 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.89□□□□□ -1.47
LIG1P18858 AC018644.1-201ENST00000429934 551 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC009238.2-201ENST00000431026 355 ntBASIC5.89□□□□□ -1.47
LIG1P18858 RPL36AP53-201ENST00000432891 316 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC016691.1-201ENST00000441321 413 ntBASIC5.89□□□□□ -1.47
LIG1P18858 RPS11P7-201ENST00000442125 465 ntBASIC5.89□□□□□ -1.47
LIG1P18858 MRPL50P4-201ENST00000446432 475 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC004980.3-201ENST00000447046 365 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.89□□□□□ -1.47
LIG1P18858 IFNWP4-201ENST00000453148 294 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AL121877.1-201ENST00000453704 622 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC005229.2-201ENST00000456995 399 ntBASIC5.89□□□□□ -1.47
LIG1P18858 RN7SL172P-201ENST00000460535 303 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC072052.1-201ENST00000496556 306 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.89□□□□□ -1.47
LIG1P18858 SNORA40.12-201ENST00000516329 111 ntBASIC5.89□□□□□ -1.47
LIG1P18858 RNU7-30P-201ENST00000516835 62 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.89□□□□□ -1.47
LIG1P18858 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.89□□□□□ -1.47
LIG1P18858 AC012182.1-201ENST00000570133 895 ntBASIC5.89□□□□□ -1.47
LIG1P18858 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.89□□□□□ -1.47
LIG1P18858 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.89□□□□□ -1.47
LIG1P18858 AL121655.1-201ENST00000605811 308 ntBASIC5.89□□□□□ -1.47
LIG1P18858 AL133255.1-201ENST00000606374 441 ntBASIC5.89□□□□□ -1.47
LIG1P18858 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.89□□□□□ -1.47
LIG1P18858 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 TPTEP1-208ENST00000636884 213 ntBASIC5.89□□□□□ -1.47
LIG1P18858 MTND5P42-201ENST00000637720 498 ntBASIC5.89□□□□□ -1.47
LIG1P18858 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LIG1P18858 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LIG1P18858 NEAT1-202ENST00000501122 22743 ntBASIC5.89□□□□□ -1.47
LIG1P18858 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIG1P18858 NUP58P1-201ENST00000502546 1738 ntBASIC5.88□□□□□ -1.47
LIG1P18858 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LIG1P18858 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.88□□□□□ -1.47
LIG1P18858 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.88□□□□□ -1.47
LIG1P18858 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LIG1P18858 Y_RNA.381-201ENST00000365666 102 ntBASIC5.88□□□□□ -1.47
LIG1P18858 RNU6-74P-201ENST00000384235 107 ntBASIC5.88□□□□□ -1.47
LIG1P18858 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LIG1P18858 RNU6-1158P-201ENST00000391167 107 ntBASIC5.88□□□□□ -1.47
LIG1P18858 BTBD10P2-201ENST00000404779 676 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AL354719.1-201ENST00000406535 843 ntBASIC5.88□□□□□ -1.47
LIG1P18858 RNU6-1068P-201ENST00000410958 103 ntBASIC5.88□□□□□ -1.47
LIG1P18858 RN7SKP140-201ENST00000411196 284 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.88□□□□□ -1.47
LIG1P18858 AL358176.3-201ENST00000420757 454 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AC010881.1-201ENST00000433830 235 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AC239809.1-201ENST00000450470 217 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.88□□□□□ -1.47
LIG1P18858 AC026427.2-201ENST00000506228 536 ntBASIC5.88□□□□□ -1.47
LIG1P18858 RNU6-202P-201ENST00000515998 96 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.88□□□□□ -1.47
LIG1P18858 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.88□□□□□ -1.47
LIG1P18858 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.88□□□□□ -1.47
LIG1P18858 AP003072.2-201ENST00000527756 676 ntBASIC5.88□□□□□ -1.47
LIG1P18858 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIG1P18858 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.88□□□□□ -1.47
LIG1P18858 MIR3167-201ENST00000579623 85 ntBASIC5.88□□□□□ -1.47
LIG1P18858 AC008687.2-201ENST00000597865 520 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms