Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGA1P17096 AC007423.1-201ENST00000605009 627 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGA1P17096 AC116312.1-201ENST00000606841 314 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGA1P17096 XPOTP1-201ENST00000443317 2398 ntBASIC2.6□□□□□ -1.99
HMGA1P17096 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGA1P17096 RNA5SP456-201ENST00000364002 114 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 SNORD21-201ENST00000383953 95 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGA1P17096 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.59□□□□□ -1.99
HMGA1P17096 OOSP1P1-201ENST00000423265 274 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 GAPDHP27-201ENST00000447427 1020 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 SEPT7P6-201ENST00000469999 1143 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGA1P17096 AC126182.1-201ENST00000478134 357 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 TRBV12-1-201ENST00000479785 344 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
HMGA1P17096 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGA1P17096 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGA1P17096 AC064859.1-201ENST00000624741 174 ntBASIC2.59□□□□□ -1.99
HMGA1P17096 AC093010.3-201ENST00000570269 15214 ntBASIC2.59□□□□□ -2
HMGA1P17096 AC009501.3-201ENST00000605001 1352 ntBASIC2.59□□□□□ -2
HMGA1P17096 AL161431.1-201ENST00000618966 4205 ntBASIC2.59□□□□□ -2
HMGA1P17096 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.59□□□□□ -2
HMGA1P17096 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
HMGA1P17096 AC007336.1-201ENST00000576365 3828 ntBASIC2.58□□□□□ -2
HMGA1P17096 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HMGA1P17096 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGA1P17096 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.58□□□□□ -2
HMGA1P17096 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.58□□□□□ -2
HMGA1P17096 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.58□□□□□ -2
HMGA1P17096 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HMGA1P17096 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGA1P17096 SNORA3.2-201ENST00000408221 125 ntBASIC2.58□□□□□ -2
HMGA1P17096 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
HMGA1P17096 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.58□□□□□ -2
HMGA1P17096 RPL7P10-201ENST00000417407 739 ntBASIC2.58□□□□□ -2
HMGA1P17096 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.58□□□□□ -2
HMGA1P17096 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.58□□□□□ -2
HMGA1P17096 AL513175.2-201ENST00000422071 443 ntBASIC2.58□□□□□ -2
HMGA1P17096 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.58□□□□□ -2
HMGA1P17096 RPL36AP33-201ENST00000450395 310 ntBASIC2.58□□□□□ -2
HMGA1P17096 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.58□□□□□ -2
HMGA1P17096 RPL23AP45-201ENST00000476406 468 ntBASIC2.58□□□□□ -2
HMGA1P17096 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
HMGA1P17096 POU5F1P7-201ENST00000508759 541 ntBASIC2.58□□□□□ -2
HMGA1P17096 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
HMGA1P17096 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.58□□□□□ -2
HMGA1P17096 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.58□□□□□ -2
HMGA1P17096 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.58□□□□□ -2
HMGA1P17096 CD24P2-201ENST00000565486 219 ntBASIC2.58□□□□□ -2
HMGA1P17096 RPL23AP84-201ENST00000571193 464 ntBASIC2.58□□□□□ -2
HMGA1P17096 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.58□□□□□ -2
HMGA1P17096 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.58□□□□□ -2
HMGA1P17096 AL136964.1-201ENST00000622038 2990 ntBASIC2.58□□□□□ -2
HMGA1P17096 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
HMGA1P17096 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGA1P17096 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HMGA1P17096 MIR592-201ENST00000384959 97 ntBASIC2.57□□□□□ -2
HMGA1P17096 RNU2-6P-201ENST00000411404 190 ntBASIC2.57□□□□□ -2
HMGA1P17096 AC105402.1-201ENST00000413336 545 ntBASIC2.57□□□□□ -2
HMGA1P17096 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.57□□□□□ -2
HMGA1P17096 MUPP-201ENST00000438111 566 ntBASIC2.57□□□□□ -2
HMGA1P17096 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.57□□□□□ -2
HMGA1P17096 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.57□□□□□ -2
HMGA1P17096 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.57□□□□□ -2
HMGA1P17096 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
HMGA1P17096 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.57□□□□□ -2
HMGA1P17096 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.57□□□□□ -2
HMGA1P17096 ATP5F1P7-201ENST00000567330 760 ntBASIC2.57□□□□□ -2
HMGA1P17096 MTCO3P13-201ENST00000577757 781 ntBASIC2.57□□□□□ -2
HMGA1P17096 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
HMGA1P17096 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.57□□□□□ -2
HMGA1P17096 CRYM-AS1-204ENST00000637983 556 ntBASIC2.57□□□□□ -2
HMGA1P17096 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
HMGA1P17096 RLIMP2-201ENST00000427891 1563 ntBASIC2.57□□□□□ -2
HMGA1P17096 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.57□□□□□ -2
HMGA1P17096 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.56□□□□□ -2
HMGA1P17096 AL445437.1-201ENST00000623157 3087 ntBASIC2.56□□□□□ -2
HMGA1P17096 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
HMGA1P17096 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.56□□□□□ -2
HMGA1P17096 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
HMGA1P17096 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
HMGA1P17096 NANOGP5-201ENST00000424456 877 ntBASIC2.56□□□□□ -2
HMGA1P17096 SEC63P1-201ENST00000425785 1258 ntBASIC2.56□□□□□ -2
HMGA1P17096 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.56□□□□□ -2
HMGA1P17096 AC093151.1-201ENST00000427711 313 ntBASIC2.56□□□□□ -2
HMGA1P17096 AL353597.2-202ENST00000434901 373 ntBASIC2.56□□□□□ -2
HMGA1P17096 USP9YP7-201ENST00000436723 430 ntBASIC2.56□□□□□ -2
HMGA1P17096 USP9YP32-201ENST00000452432 430 ntBASIC2.56□□□□□ -2
HMGA1P17096 IFNWP4-201ENST00000453148 294 ntBASIC2.56□□□□□ -2
HMGA1P17096 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.56□□□□□ -2
HMGA1P17096 AC234781.5-201ENST00000508429 271 ntBASIC2.56□□□□□ -2
HMGA1P17096 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.56□□□□□ -2
HMGA1P17096 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.56□□□□□ -2
HMGA1P17096 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
HMGA1P17096 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms