Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXD8P13378 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXD8P13378 MSL3P1-202ENST00000440028 1468 ntBASIC5.88□□□□□ -1.47
HOXD8P13378 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXD8P13378 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXD8P13378 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXD8P13378 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXD8P13378 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXD8P13378 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXD8P13378 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXD8P13378 MTND5P10-201ENST00000603719 1809 ntBASIC5.88□□□□□ -1.47
HOXD8P13378 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXD8P13378 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXD8P13378 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXD8P13378 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXD8P13378 INTS6P1-201ENST00000504674 2530 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXD8P13378 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXD8P13378 RNU6-552P-201ENST00000362869 119 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 HSPA8P15-201ENST00000401676 786 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AL592114.1-201ENST00000403842 483 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AL139396.1-201ENST00000421137 167 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 MTCYBP9-201ENST00000431021 303 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXD8P13378 UBE2V1P13-201ENST00000436983 439 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 PRPS1P1-201ENST00000445305 876 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 RPL7P52-201ENST00000449200 742 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXD8P13378 MRPS31P2-201ENST00000451581 518 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 NANOGP10-201ENST00000453325 895 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AP000797.2-201ENST00000475768 606 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AC012123.2-201ENST00000485809 248 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 RN7SKP24-201ENST00000515888 284 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXD8P13378 AC009902.1-201ENST00000519351 183 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 COPS8P3-201ENST00000526024 482 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXD8P13378 AC008269.2-201ENST00000561915 1105 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 MIR4790-201ENST00000577799 79 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXD8P13378 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXD8P13378 AL592436.1-201ENST00000605135 558 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
HOXD8P13378 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXD8P13378 ELL2P4-201ENST00000446870 1376 ntBASIC5.87□□□□□ -1.47
HOXD8P13378 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXD8P13378 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXD8P13378 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXD8P13378 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXD8P13378 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXD8P13378 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXD8P13378 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 AC244517.1-201ENST00000606030 2086 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 CDC27P2-201ENST00000425026 1922 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HOXD8P13378 AC011460.1-201ENST00000636268 1834 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC097714.1-201ENST00000511272 1647 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 Y_RNA.149-201ENST00000363558 117 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 RPS4XP9-201ENST00000405151 780 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXD8P13378 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 NDUFB4P8-201ENST00000435351 367 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 TIMM9P1-201ENST00000436122 256 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXD8P13378 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXD8P13378 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXD8P13378 RPL7L1P8-201ENST00000469911 741 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXD8P13378 RNA5SP228-201ENST00000516232 133 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 RNU6-1038P-201ENST00000516516 104 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 RN7SKP219-201ENST00000516825 296 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 RNA5SP503-201ENST00000517047 117 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC012400.1-201ENST00000518452 381 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AP001804.3-201ENST00000525146 880 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC103843.2-201ENST00000530523 682 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC068993.1-201ENST00000546724 589 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 SETP2-201ENST00000553886 926 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.86□□□□□ -1.47
HOXD8P13378 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXD8P13378 AC090615.1-201ENST00000577519 154 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 MIR5690-201ENST00000583739 73 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 MIR3942-201ENST00000585264 109 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AC011477.5-201ENST00000586571 259 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HOXD8P13378 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXD8P13378 AL355816.1-201ENST00000607951 118 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 FAM25E-202ENST00000608562 189 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 AL031666.3-201ENST00000609320 1006 ntBASIC5.86□□□□□ -1.47
HOXD8P13378 MIR6820-201ENST00000611508 62 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms