Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.09□□□□□ -1.75
PCNAP12004 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.09□□□□□ -1.75
PCNAP12004 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.09□□□□□ -1.75
PCNAP12004 AC007954.1-201ENST00000554198 494 ntBASIC4.09□□□□□ -1.75
PCNAP12004 AC068831.4-201ENST00000556118 109 ntBASIC4.09□□□□□ -1.75
PCNAP12004 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.09□□□□□ -1.75
PCNAP12004 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.09□□□□□ -1.75
PCNAP12004 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.09□□□□□ -1.75
PCNAP12004 AC105129.3-201ENST00000605455 485 ntBASIC4.09□□□□□ -1.75
PCNAP12004 AC233309.1-201ENST00000619522 751 ntBASIC4.09□□□□□ -1.75
PCNAP12004 AC009318.4-201ENST00000620496 486 ntBASIC4.09□□□□□ -1.75
PCNAP12004 AL356266.1-201ENST00000623311 483 ntBASIC4.09□□□□□ -1.75
PCNAP12004 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.09□□□□□ -1.75
PCNAP12004 AC008013.2-202ENST00000637965 364 ntBASIC4.09□□□□□ -1.75
PCNAP12004 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.09□□□□□ -1.75
PCNAP12004 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
PCNAP12004 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCNAP12004 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCNAP12004 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCNAP12004 MAPK10-253ENST00000641010 4072 ntBASIC4.08□□□□□ -1.76
PCNAP12004 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCNAP12004 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCNAP12004 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCNAP12004 RNU6-500P-201ENST00000362349 107 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RNU6-777P-201ENST00000364265 104 ntBASIC4.08□□□□□ -1.76
PCNAP12004 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PCNAP12004 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.08□□□□□ -1.76
PCNAP12004 AL024474.1-201ENST00000404655 591 ntBASIC4.08□□□□□ -1.76
PCNAP12004 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.08□□□□□ -1.76
PCNAP12004 MIR1179-201ENST00000408703 91 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC011933.1-201ENST00000413334 321 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.08□□□□□ -1.76
PCNAP12004 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 AC019178.2-201ENST00000423595 505 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AL157831.1-201ENST00000426134 473 ntBASIC4.08□□□□□ -1.76
PCNAP12004 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCNAP12004 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 RPS29P17-201ENST00000430795 166 ntBASIC4.08□□□□□ -1.76
PCNAP12004 MTCYBP39-201ENST00000437562 491 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 ZNF114P1-201ENST00000453500 292 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RNU7-136P-201ENST00000458819 69 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC116533.1-201ENST00000459748 321 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RPL30P9-201ENST00000465586 330 ntBASIC4.08□□□□□ -1.76
PCNAP12004 SETP11-201ENST00000473027 690 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RPS23P1-201ENST00000491662 432 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RNF138P1-201ENST00000502765 546 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC093767.1-201ENST00000504523 156 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 OR5BM1P-201ENST00000512021 366 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC023141.12-201ENST00000512399 199 ntBASIC4.08□□□□□ -1.76
PCNAP12004 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 AC005798.1-201ENST00000513715 387 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RNA5SP519-201ENST00000516480 119 ntBASIC4.08□□□□□ -1.76
PCNAP12004 RN7SKP234-201ENST00000517173 224 ntBASIC4.08□□□□□ -1.76
PCNAP12004 IGKV2D-36-201ENST00000518643 226 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC239860.2-201ENST00000525886 270 ntBASIC4.08□□□□□ -1.76
PCNAP12004 OR4A45P-201ENST00000529954 901 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 CR383656.6-201ENST00000550518 394 ntBASIC4.08□□□□□ -1.76
PCNAP12004 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCNAP12004 TVP23BP1-201ENST00000557500 617 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC018555.1-201ENST00000567548 1980 ntBASIC4.08□□□□□ -1.76
PCNAP12004 ROCK1P1-201ENST00000573767 549 ntBASIC4.08□□□□□ -1.76
PCNAP12004 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.08□□□□□ -1.76
PCNAP12004 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 VN1R92P-201ENST00000598511 928 ntBASIC4.08□□□□□ -1.76
PCNAP12004 HMGB1P50-201ENST00000605814 607 ntBASIC4.08□□□□□ -1.76
PCNAP12004 AP003117.2-201ENST00000606010 545 ntBASIC4.08□□□□□ -1.76
PCNAP12004 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCNAP12004 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCNAP12004 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.08□□□□□ -1.76
PCNAP12004 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCNAP12004 AC099063.3-201ENST00000642066 185 ntBASIC4.08□□□□□ -1.76
PCNAP12004 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.08□□□□□ -1.76
PCNAP12004 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCNAP12004 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCNAP12004 AC011978.2-201ENST00000569835 2054 ntBASIC4.07□□□□□ -1.76
PCNAP12004 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCNAP12004 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCNAP12004 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCNAP12004 OR4G11P-202ENST00000642116 1414 ntBASIC4.07□□□□□ -1.76
PCNAP12004 MTND4P16-201ENST00000466108 1367 ntBASIC4.07□□□□□ -1.76
PCNAP12004 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCNAP12004 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCNAP12004 RNU1-14P-201ENST00000362759 152 ntBASIC4.07□□□□□ -1.76
PCNAP12004 RNA5SP88-201ENST00000365560 109 ntBASIC4.07□□□□□ -1.76
PCNAP12004 U3.22-201ENST00000391120 215 ntBASIC4.07□□□□□ -1.76
PCNAP12004 RN7SKP235-201ENST00000410662 305 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms