Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
THBS1P07996 Y_RNA.64-201ENST00000362845 102 ntBASIC5.7□□□□□ -1.5
THBS1P07996 RNA5SP346-201ENST00000363541 121 ntBASIC5.7□□□□□ -1.5
THBS1P07996 RNU6-188P-201ENST00000364207 107 ntBASIC5.7□□□□□ -1.5
THBS1P07996 SNORD50B-201ENST00000364995 70 ntBASIC5.7□□□□□ -1.5
THBS1P07996 RNU6-48P-201ENST00000384161 107 ntBASIC5.7□□□□□ -1.5
THBS1P07996 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
THBS1P07996 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
THBS1P07996 RN7SKP126-201ENST00000411143 300 ntBASIC5.7□□□□□ -1.5
THBS1P07996 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.7□□□□□ -1.5
THBS1P07996 RAC1P3-201ENST00000416129 580 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AL358176.3-201ENST00000420757 454 ntBASIC5.7□□□□□ -1.5
THBS1P07996 OSTCP4-201ENST00000424397 449 ntBASIC5.7□□□□□ -1.5
THBS1P07996 C4BPAP2-201ENST00000428434 478 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.7□□□□□ -1.5
THBS1P07996 RPL35AP22-201ENST00000436855 335 ntBASIC5.7□□□□□ -1.5
THBS1P07996 H3F3BP1-201ENST00000440551 403 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.7□□□□□ -1.5
THBS1P07996 RPS7P3-201ENST00000443360 580 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AC007967.1-201ENST00000455422 1159 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.7□□□□□ -1.5
THBS1P07996 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 CR383656.1-201ENST00000484916 377 ntBASIC5.7□□□□□ -1.5
THBS1P07996 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.7□□□□□ -1.5
THBS1P07996 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
THBS1P07996 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AC097486.1-201ENST00000515331 210 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AC104057.1-201ENST00000515547 497 ntBASIC5.7□□□□□ -1.5
THBS1P07996 RNU6-798P-201ENST00000516912 103 ntBASIC5.7□□□□□ -1.5
THBS1P07996 RNU6-1212P-201ENST00000517023 104 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.7□□□□□ -1.5
THBS1P07996 MIR3133-201ENST00000583157 78 ntBASIC5.7□□□□□ -1.5
THBS1P07996 MIR4420-201ENST00000583944 77 ntBASIC5.7□□□□□ -1.5
THBS1P07996 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.7□□□□□ -1.5
THBS1P07996 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.7□□□□□ -1.5
THBS1P07996 HMGB1P50-201ENST00000605814 607 ntBASIC5.7□□□□□ -1.5
THBS1P07996 NANOGP3-201ENST00000605855 286 ntBASIC5.7□□□□□ -1.5
THBS1P07996 AL355816.1-201ENST00000607951 118 ntBASIC5.7□□□□□ -1.5
THBS1P07996 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
THBS1P07996 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.7□□□□□ -1.5
THBS1P07996 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
THBS1P07996 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.7□□□□□ -1.5
THBS1P07996 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 AC104966.1-201ENST00000467010 1464 ntBASIC5.7□□□□□ -1.5
THBS1P07996 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
THBS1P07996 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.7□□□□□ -1.5
THBS1P07996 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
THBS1P07996 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.69□□□□□ -1.5
THBS1P07996 Y_RNA.297-201ENST00000364950 91 ntBASIC5.69□□□□□ -1.5
THBS1P07996 RNA5SP240-201ENST00000365355 128 ntBASIC5.69□□□□□ -1.5
THBS1P07996 PRELID1P1-201ENST00000403549 660 ntBASIC5.69□□□□□ -1.5
THBS1P07996 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.69□□□□□ -1.5
THBS1P07996 AC099782.1-201ENST00000425889 474 ntBASIC5.69□□□□□ -1.5
THBS1P07996 AC245884.2-201ENST00000426257 404 ntBASIC5.69□□□□□ -1.5
THBS1P07996 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.69□□□□□ -1.5
THBS1P07996 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.69□□□□□ -1.5
THBS1P07996 REG1CP-206ENST00000447469 496 ntBASIC5.69□□□□□ -1.5
THBS1P07996 AC104073.1-201ENST00000451988 151 ntBASIC5.69□□□□□ -1.5
THBS1P07996 RN7SL362P-201ENST00000494228 267 ntBASIC5.69□□□□□ -1.5
THBS1P07996 MTCO3P44-201ENST00000510977 541 ntBASIC5.69□□□□□ -1.5
THBS1P07996 RNU6-64P-201ENST00000517119 105 ntBASIC5.69□□□□□ -1.5
THBS1P07996 AL049839.1-201ENST00000556151 657 ntBASIC5.69□□□□□ -1.5
THBS1P07996 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
THBS1P07996 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 AC130289.1-201ENST00000577321 73 ntBASIC5.69□□□□□ -1.5
THBS1P07996 MIR3154-201ENST00000577829 84 ntBASIC5.69□□□□□ -1.5
THBS1P07996 RAC1P9-201ENST00000604990 392 ntBASIC5.69□□□□□ -1.5
THBS1P07996 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
THBS1P07996 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
THBS1P07996 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
THBS1P07996 SAMMSON-213ENST00000641336 1521 ntBASIC5.69□□□□□ -1.5
THBS1P07996 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.68□□□□□ -1.5
THBS1P07996 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
THBS1P07996 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms