Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HIGD1AP13-201ENST00000509878 289 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC010265.1-201ENST00000513509 211 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RNU4-60P-201ENST00000517239 135 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RPL12P22-201ENST00000519073 490 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 HPRT1P3-201ENST00000539521 576 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC010198.2-201ENST00000550612 259 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 AC005000.2-201ENST00000605468 310 ntBASIC2.85□□□□□ -1.95
HLA-DQB2P05538 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DQB2P05538 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC105402.1-201ENST00000413336 545 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC005921.1-201ENST00000510589 286 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 IGKV2-36-201ENST00000519999 223 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC010306.1-201ENST00000523223 1117 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AP002812.4-201ENST00000532139 286 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 ZNF92P3-201ENST00000596594 954 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC012119.1-201ENST00000603184 222 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AL392112.1-201ENST00000605115 829 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC018754.1-201ENST00000607486 925 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC112503.1-201ENST00000608436 391 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 AC121761.2-201ENST00000617300 689 ntBASIC2.84□□□□□ -1.95
HLA-DQB2P05538 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
HLA-DQB2P05538 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DQB2P05538 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 SNORA31-201ENST00000362607 130 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AP000567.1-201ENST00000406413 156 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 HNRNPDP2-201ENST00000406475 478 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 RPL5P18-201ENST00000406671 891 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 BMS1P22-201ENST00000414726 313 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AL356806.1-201ENST00000422524 916 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AL160175.1-201ENST00000428124 247 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC096992.1-201ENST00000459808 709 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC146507.1-201ENST00000468335 354 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 DYNLL1P6-201ENST00000503440 264 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 POU5F1P7-201ENST00000508759 541 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AL049870.4-201ENST00000555741 486 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 ZNF861P-201ENST00000588126 639 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC005046.1-201ENST00000608515 625 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC118273.1-201ENST00000525324 3006 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC108206.1-201ENST00000570186 4159 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 AC022031.1-201ENST00000585985 2593 ntBASIC2.83□□□□□ -1.96
HLA-DQB2P05538 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 MTND5P3-201ENST00000438536 1800 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 RNU6-356P-201ENST00000384140 107 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 RNU6-452P-201ENST00000384406 107 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 RNU2-21P-201ENST00000410368 188 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 TRIAP1P1-201ENST00000427062 225 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DQB2P05538 PCNAP1-201ENST00000505363 709 ntBASIC2.82□□□□□ -1.96
HLA-DQB2P05538 HMGB3P15-201ENST00000507326 574 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms