Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC090897.3-201ENST00000636973 1157 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SPTA1P02549 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SPTA1P02549 RNU4-44P-201ENST00000363050 141 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 U3.6-201ENST00000363622 211 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
SPTA1P02549 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC004987.3-201ENST00000413879 771 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 ISCA1P2-201ENST00000438679 421 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.38□□□□□ -2.03
SPTA1P02549 AC010198.2-201ENST00000550612 259 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.38□□□□□ -2.03
SPTA1P02549 Z82195.1-201ENST00000604558 398 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 AC128687.1-201ENST00000605304 619 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 U4.3-201ENST00000621047 82 ntBASIC2.38□□□□□ -2.03
SPTA1P02549 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SPTA1P02549 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 AC127526.1-201ENST00000417526 366 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.37□□□□□ -2.03
SPTA1P02549 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.37□□□□□ -2.03
SPTA1P02549 DNAJC19P4-201ENST00000440115 345 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.37□□□□□ -2.03
SPTA1P02549 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 AL121877.1-201ENST00000453704 622 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 RN7SL636P-201ENST00000497504 294 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.37□□□□□ -2.03
SPTA1P02549 AL008729.2-201ENST00000606393 473 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AL451049.1-201ENST00000608672 497 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SPTA1P02549 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 TAB3P1-202ENST00000452645 1634 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SPTA1P02549 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SPTA1P02549 MIR30E-201ENST00000362104 92 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SPTA1P02549 OR2B8P-201ENST00000432841 938 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AC133473.1-201ENST00000455173 299 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.37□□□□□ -2.03
SPTA1P02549 AC108471.1-201ENST00000513977 287 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 TRAV11-201ENST00000539512 339 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.37□□□□□ -2.03
SPTA1P02549 SUB1P3-201ENST00000564581 315 ntBASIC2.37□□□□□ -2.03
SPTA1P02549 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.37□□□□□ -2.03
SPTA1P02549 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SPTA1P02549 ELL2P4-201ENST00000446870 1376 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SPTA1P02549 MIR378A-201ENST00000362177 66 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 RNU1-35P-201ENST00000362782 153 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 GSTA9P-201ENST00000406231 611 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 Z82205.1-201ENST00000428456 297 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 MTCO3P21-201ENST00000430791 643 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 Z99127.2-201ENST00000441426 334 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 RN7SL442P-201ENST00000473804 320 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
SPTA1P02549 AC090281.1-201ENST00000523019 276 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.36□□□□□ -2.03
SPTA1P02549 AP001317.1-201ENST00000531194 960 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SPTA1P02549 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.36□□□□□ -2.03
SPTA1P02549 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.36□□□□□ -2.03
SPTA1P02549 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.36□□□□□ -2.03
SPTA1P02549 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.36□□□□□ -2.03
SPTA1P02549 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
SPTA1P02549 AC079298.2-201ENST00000623885 459 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SPTA1P02549 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.36□□□□□ -2.03
SPTA1P02549 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.36□□□□□ -2.03
SPTA1P02549 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SPTA1P02549 GCNT6-201ENST00000379591 934 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 U8.13-201ENST00000390842 128 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 FCF1P1-201ENST00000432690 571 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 AC011816.1-201ENST00000441346 546 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 AC093663.2-201ENST00000484625 313 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SPTA1P02549 AL391156.1-201ENST00000554965 554 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SPTA1P02549 AC068313.1-201ENST00000604028 1008 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 AC016542.2-201ENST00000624201 619 ntBASIC2.36□□□□□ -2.03
SPTA1P02549 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.35□□□□□ -2.03
SPTA1P02549 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SPTA1P02549 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SPTA1P02549 AC011460.1-201ENST00000636268 1834 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 MAPK10-362ENST00000641864 4484 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 RNU6-76P-201ENST00000384060 104 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 SNORA80E-201ENST00000384744 137 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 Z98742.3-201ENST00000418637 326 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 AC007677.1-201ENST00000445757 515 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
SPTA1P02549 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.35□□□□□ -2.03
SPTA1P02549 AC108078.2-201ENST00000510750 236 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 AC112673.1-201ENST00000513168 575 ntBASIC2.35□□□□□ -2.03
SPTA1P02549 RN7SKP24-201ENST00000515888 284 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms