Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL355836.1-201ENST00000555951 870 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.17□□□□□ -1.9
COL1A1P02452 Z99129.2-201ENST00000619967 314 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 AP006248.2-201ENST00000623309 592 ntBASIC3.17□□□□□ -1.9
COL1A1P02452 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.17□□□□□ -1.9
COL1A1P02452 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL1A1P02452 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL1A1P02452 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
COL1A1P02452 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL1A1P02452 SNORD62.1-201ENST00000362541 86 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 SNORA3.2-201ENST00000408221 125 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.16□□□□□ -1.9
COL1A1P02452 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
COL1A1P02452 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.16□□□□□ -1.9
COL1A1P02452 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
COL1A1P02452 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.16□□□□□ -1.9
COL1A1P02452 AL590399.6-201ENST00000446396 307 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.16□□□□□ -1.9
COL1A1P02452 snoU13.23-201ENST00000458863 104 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 RNA5SP76-201ENST00000516277 87 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 SNORA9.3-201ENST00000516383 129 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.16□□□□□ -1.9
COL1A1P02452 UBTFL10-201ENST00000528532 562 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
COL1A1P02452 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.16□□□□□ -1.9
COL1A1P02452 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.16□□□□□ -1.9
COL1A1P02452 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL1A1P02452 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.16□□□□□ -1.9
COL1A1P02452 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
COL1A1P02452 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
COL1A1P02452 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL1A1P02452 RNA5SP289-201ENST00000362332 137 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 RN7SKP44-201ENST00000363602 316 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AC099336.2-201ENST00000422457 254 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 SEC63P1-201ENST00000425785 1258 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AC244505.4-201ENST00000434905 287 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 SSXP5-201ENST00000443473 287 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL1A1P02452 RPL23AP44-201ENST00000482216 473 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AC147055.1-201ENST00000509261 750 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 RN7SKP244-201ENST00000516513 307 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 IGKV3-31-201ENST00000523109 329 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AP001207.1-201ENST00000524051 481 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.16□□□□□ -1.9
COL1A1P02452 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.16□□□□□ -1.9
COL1A1P02452 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.16□□□□□ -1.9
COL1A1P02452 AC012119.1-201ENST00000603184 222 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 AC007621.1-201ENST00000604544 437 ntBASIC3.16□□□□□ -1.9
COL1A1P02452 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.16□□□□□ -1.9
COL1A1P02452 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL1A1P02452 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.15□□□□□ -1.9
COL1A1P02452 ZNF542P-204ENST00000482727 1305 ntBASIC3.15□□□□□ -1.9
COL1A1P02452 AP000526.1-201ENST00000603308 1388 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.91
COL1A1P02452 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL1A1P02452 FAM133CP-201ENST00000332869 704 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL1A1P02452 MIR764-201ENST00000390811 85 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL1A1P02452 ISCA1P6-201ENST00000427740 390 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.15□□□□□ -1.91
COL1A1P02452 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.15□□□□□ -1.91
COL1A1P02452 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.15□□□□□ -1.91
COL1A1P02452 snoU13.15-201ENST00000459407 104 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 RNU6-943P-201ENST00000516960 98 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.15□□□□□ -1.91
COL1A1P02452 AC128657.1-201ENST00000549459 145 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 AL389895.1-201ENST00000554127 252 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 AL121839.1-201ENST00000556233 1185 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.15□□□□□ -1.91
COL1A1P02452 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.15□□□□□ -1.91
COL1A1P02452 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL1A1P02452 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.15□□□□□ -1.91
COL1A1P02452 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL1A1P02452 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL1A1P02452 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.15□□□□□ -1.91
COL1A1P02452 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COL1A1P02452 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL1A1P02452 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COL1A1P02452 MTND5P27-201ENST00000428871 1720 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL1A1P02452 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL1A1P02452 PHKBP1-201ENST00000450951 1951 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.14□□□□□ -1.91
COL1A1P02452 AC134882.1-201ENST00000603738 1676 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 U8.2-201ENST00000363156 134 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 AC021205.1-201ENST00000468797 348 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.14□□□□□ -1.91
COL1A1P02452 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.14□□□□□ -1.91
COL1A1P02452 RPL7P20-201ENST00000520308 745 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL1A1P02452 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.14□□□□□ -1.91
COL1A1P02452 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.14□□□□□ -1.91
COL1A1P02452 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 AC116447.1-201ENST00000613153 453 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms