Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 FAR2P4-202ENST00000425399 584 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 USP9YP7-201ENST00000436723 430 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 Z95327.1-201ENST00000446082 482 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 PAXBP1P1-201ENST00000449315 447 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 USP9YP32-201ENST00000452432 430 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AL645939.1-201ENST00000453429 797 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 RPL36AP13-201ENST00000457490 317 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 SETP11-201ENST00000473027 690 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC006463.2-201ENST00000473326 348 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 MTND3P7-201ENST00000474435 343 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC104563.1-201ENST00000476147 376 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC023424.2-201ENST00000493479 777 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC108475.1-201ENST00000507880 950 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 TXNP6-201ENST00000510190 310 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 OR5AP1P-201ENST00000529730 940 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 MIR3915-201ENST00000578518 97 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AP001004.1-201ENST00000582468 324 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NKX2-2O95096 WISP1-OT1-201ENST00000602893 642 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AC106028.5-201ENST00000610332 395 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 AL031985.3-201ENST00000565390 2449 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-2O95096 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-2O95096 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-2O95096 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-2O95096 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-2O95096 RNA5SP258-201ENST00000362750 119 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 RNU6-289P-201ENST00000364093 107 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 Y_RNA.560-201ENST00000384689 102 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC007066.1-201ENST00000392902 381 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 MIR320C1-201ENST00000408566 88 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 RNU6-920P-201ENST00000410926 92 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 Z99497.1-201ENST00000421282 135 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-2O95096 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-2O95096 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-2O95096 AL512649.1-201ENST00000428997 581 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 COX6B1P7-201ENST00000430845 235 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-2O95096 ISCA1P2-201ENST00000438679 421 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 HMGB1P15-201ENST00000453854 435 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-2O95096 BTF3P5-201ENST00000457252 467 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC010468.1-201ENST00000461022 817 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 RPL7AP28-201ENST00000464513 571 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 RPL30P9-201ENST00000465586 330 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 UQCRHP4-201ENST00000471686 272 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX2-2O95096 AF213884.1-201ENST00000488102 463 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 RPS6P4-201ENST00000494693 758 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 RPL5P23-201ENST00000496040 868 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-2O95096 COX7A2P2-201ENST00000505291 250 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC093824.1-201ENST00000508796 343 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-2O95096 RAB9BP1-201ENST00000519581 626 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-2O95096 SETP7-201ENST00000552169 453 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-2O95096 AC022655.2-201ENST00000577280 318 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 MIR3138-201ENST00000585238 82 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-2O95096 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-2O95096 AC005255.1-201ENST00000593748 216 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 AC233280.2-201ENST00000603917 1070 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-2O95096 AC006927.3-201ENST00000638789 384 ntBASIC3.85□□□□□ -1.79
NKX2-2O95096 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NKX2-2O95096 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms