Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MTND5P4-201ENST00000514978 288 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 SNORA31.9-201ENST00000516429 84 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AP002963.1-201ENST00000530590 184 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AC068587.4-201ENST00000533893 186 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZIC3O60481 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.84□□□□□ -1.79
ZIC3O60481 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.84□□□□□ -1.79
ZIC3O60481 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.84□□□□□ -1.79
ZIC3O60481 AL161713.1-201ENST00000555538 145 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 HMGB3P26-201ENST00000560051 582 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AC005951.1-201ENST00000576706 485 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ZIC3O60481 AC022146.1-201ENST00000595307 847 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AC007566.2-201ENST00000603642 413 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AC068276.1-201ENST00000605793 379 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AC090186.1-201ENST00000605991 572 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 AL357080.1-201ENST00000617394 239 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 MIR8059-201ENST00000620427 81 ntBASIC3.84□□□□□ -1.79
ZIC3O60481 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.84□□□□□ -1.79
ZIC3O60481 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.84□□□□□ -1.79
ZIC3O60481 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.84□□□□□ -1.79
ZIC3O60481 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZIC3O60481 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.84□□□□□ -1.79
ZIC3O60481 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.84□□□□□ -1.79
ZIC3O60481 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ZIC3O60481 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.84□□□□□ -1.8
ZIC3O60481 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.84□□□□□ -1.8
ZIC3O60481 MAPK10-349ENST00000641767 3661 ntBASIC3.84□□□□□ -1.8
ZIC3O60481 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.8
ZIC3O60481 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.84□□□□□ -1.8
ZIC3O60481 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ZIC3O60481 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ZIC3O60481 LINC01109-201ENST00000603837 3081 ntBASIC3.84□□□□□ -1.8
ZIC3O60481 AC105074.1-201ENST00000623380 3095 ntBASIC3.84□□□□□ -1.8
ZIC3O60481 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ZIC3O60481 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ZIC3O60481 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ZIC3O60481 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ZIC3O60481 RNU1-15P-201ENST00000353977 144 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RNU5F-6P-201ENST00000362979 116 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 Y_RNA.97-201ENST00000363094 102 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RNU6-289P-201ENST00000364093 107 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RNU6-343P-201ENST00000364709 104 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.83□□□□□ -1.8
ZIC3O60481 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.83□□□□□ -1.8
ZIC3O60481 Y_RNA.559-201ENST00000384686 107 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RPL31P1-201ENST00000398116 372 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 MIR320C1-201ENST00000408566 88 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 RN7SKP266-201ENST00000410232 287 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 PGBD4P8-201ENST00000412993 562 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.83□□□□□ -1.8
ZIC3O60481 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.83□□□□□ -1.8
ZIC3O60481 FNDC3CP-201ENST00000420795 1155 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RPS27AP14-201ENST00000422868 454 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 RPL23AP38-201ENST00000423801 469 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL035410.1-201ENST00000427409 427 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 COX6B1P7-201ENST00000430845 235 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 MTND1P28-201ENST00000435623 950 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 MUPP-201ENST00000438111 566 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.83□□□□□ -1.8
ZIC3O60481 USP9YP29-201ENST00000445112 563 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL592447.1-201ENST00000447592 540 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.83□□□□□ -1.8
ZIC3O60481 AC021678.1-201ENST00000505195 936 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 POU5F1P7-201ENST00000508759 541 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AC079140.3-201ENST00000511111 550 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.83□□□□□ -1.8
ZIC3O60481 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 COX6CP8-201ENST00000522620 226 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AC022861.1-201ENST00000522981 663 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.83□□□□□ -1.8
ZIC3O60481 AP004247.1-201ENST00000531556 1289 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AC100770.1-201ENST00000532310 322 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.83□□□□□ -1.8
ZIC3O60481 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.83□□□□□ -1.8
ZIC3O60481 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.83□□□□□ -1.8
ZIC3O60481 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.83□□□□□ -1.8
ZIC3O60481 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.83□□□□□ -1.8
ZIC3O60481 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.83□□□□□ -1.8
ZIC3O60481 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AC112187.2-201ENST00000604345 283 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL513477.2-201ENST00000607858 568 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL353600.1-201ENST00000608148 251 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AC103710.4-201ENST00000609301 899 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms