Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC122108.2-201ENST00000611946 526 ntBASIC4.34□□□□□ -1.71
PCDH17O14917 AL121873.1-201ENST00000616013 524 ntBASIC4.34□□□□□ -1.71
PCDH17O14917 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH17O14917 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH17O14917 AC009878.1-201ENST00000621819 340 ntBASIC4.34□□□□□ -1.71
PCDH17O14917 AL049536.1-201ENST00000625043 744 ntBASIC4.34□□□□□ -1.71
PCDH17O14917 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH17O14917 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH17O14917 NMD3P1-201ENST00000439704 1488 ntBASIC4.34□□□□□ -1.71
PCDH17O14917 AC017104.4-201ENST00000636283 1592 ntBASIC4.34□□□□□ -1.71
PCDH17O14917 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH17O14917 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
PCDH17O14917 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDH17O14917 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PCDH17O14917 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDH17O14917 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDH17O14917 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDH17O14917 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH17O14917 RNU6-744P-201ENST00000365557 107 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 RNU6-1316P-201ENST00000384242 108 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 Y_RNA.493-201ENST00000384422 102 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 MIR921-201ENST00000401133 56 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 LAP3P1-201ENST00000403648 294 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AL603766.1-201ENST00000407763 664 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 PGBD4P8-201ENST00000412993 562 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 RSU1P2-202ENST00000437884 485 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 UBE2V1P3-201ENST00000439651 417 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 EPS15P1-201ENST00000448836 336 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 DNAJC19P1-201ENST00000455312 319 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH17O14917 snoU13.8-201ENST00000458890 104 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDH17O14917 AC013356.1-201ENST00000489027 564 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 STMN1P2-201ENST00000508435 439 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 PTGES3P3-201ENST00000511479 482 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 MTND3P5-201ENST00000512798 333 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AC034159.1-201ENST00000513885 583 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 IGKV2D-36-201ENST00000518643 226 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AC025881.1-201ENST00000518851 512 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 DEFB109D-201ENST00000529497 240 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 AC084783.1-201ENST00000565846 910 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 MIR544B-201ENST00000582372 78 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AC020910.2-201ENST00000603635 610 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AC006329.2-201ENST00000611491 394 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 SNX18P1Y-201ENST00000616231 511 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AL596245.1-201ENST00000618994 362 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 AC093591.3-201ENST00000634516 308 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 MIR6830-201ENST00000636015 70 ntBASIC4.33□□□□□ -1.72
PCDH17O14917 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH17O14917 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH17O14917 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH17O14917 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDH17O14917 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
PCDH17O14917 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH17O14917 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH17O14917 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH17O14917 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
PCDH17O14917 AC092447.10-201ENST00000620607 1652 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PCDH17O14917 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDH17O14917 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH17O14917 AC087190.4-201ENST00000574616 8334 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH17O14917 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH17O14917 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH17O14917 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH17O14917 Y_RNA.97-201ENST00000363094 102 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 RNA5SP447-201ENST00000363749 119 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 RNU6-1279P-201ENST00000383917 103 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 RNA5SP372-201ENST00000390836 115 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 RNU6-821P-201ENST00000390995 107 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 U3.29-201ENST00000391296 212 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 HDGFP1-201ENST00000405943 252 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH17O14917 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH17O14917 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH17O14917 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH17O14917 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH17O14917 AL732292.1-201ENST00000426692 226 ntBASIC4.32□□□□□ -1.72
PCDH17O14917 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH17O14917 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH17O14917 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms