Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC096638.1-201ENST00000444678 216 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 RPL30P9-201ENST00000465586 330 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AC234781.5-201ENST00000508429 271 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AC034244.2-201ENST00000514668 858 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AC010928.3-201ENST00000587712 541 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 BMS1P7-201ENST00000602440 1052 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 MIR6715B-201ENST00000637172 77 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 HMGB3P23-201ENST00000414981 585 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 NANOGP5-201ENST00000424456 877 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AC093663.2-201ENST00000484625 313 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 RN7SL636P-201ENST00000497504 294 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 RN7SKP43-201ENST00000516173 320 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 RN7SKP31-201ENST00000516354 278 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 AADACP1-206ENST00000561502 1193 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 MIR4635-201ENST00000583759 79 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.33□□□□□ -1.88
RGPD3A6NKT7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.33□□□□□ -1.88
RGPD3A6NKT7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 AC022336.2-201ENST00000568966 2538 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 AC245054.2-201ENST00000415639 319 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 RPS20P5-201ENST00000434808 360 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 HMGN1P5-201ENST00000448591 263 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 AC068587.2-201ENST00000478386 781 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 AC092184.1-201ENST00000625042 715 ntBASIC3.32□□□□□ -1.88
RGPD3A6NKT7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
RGPD3A6NKT7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 OR4G1P-202ENST00000641173 1788 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 RN7SKP44-201ENST00000363602 316 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 RNA5SP99-201ENST00000364020 114 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 RPL31P1-201ENST00000398116 372 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 CACYBPP2-201ENST00000453625 678 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AC118282.1-201ENST00000506408 765 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AC119751.1-201ENST00000513357 765 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AC022884.3-201ENST00000579571 248 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AL139286.1-201ENST00000604465 483 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 AC008277.2-201ENST00000605196 797 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.31□□□□□ -1.88
RGPD3A6NKT7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RGPD3A6NKT7 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 RPLP0P7-201ENST00000416050 667 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 ZNF861P-201ENST00000588126 639 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC010338.1-201ENST00000621823 717 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 RAD1P1-201ENST00000231383 813 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC004987.3-201ENST00000413879 771 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC104454.1-201ENST00000421341 1401 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC108471.1-201ENST00000513977 287 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AP003102.1-201ENST00000525638 661 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RGPD3A6NKT7 AC110994.2-201ENST00000635481 492 ntBASIC3.3□□□□□ -1.88
RGPD3A6NKT7 OR11H5P-202ENST00000641612 1325 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms